Shewanella spartinae: K0I31_17780
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Entry
K0I31_17780 CDS
T09209
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sspa02044
]
K0I31_17780
02035 Bacterial motility proteins [BR:
sspa02035
]
K0I31_17780
Secretion system [BR:
sspa02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
K0I31_17780
Bacterial motility proteins [BR:
sspa02035
]
Pilus system
Pilus assembly proteins
K0I31_17780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF996
Motif
Other DBs
NCBI-ProteinID:
QYJ93413
LinkDB
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Position
4118956..4120227
Genome browser
AA seq
423 aa
AA seq
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MATASLAKTTTKTKKQKAAKVQPKVVTFEWKGTNRDGKKTSGELRGTSSAEIKAQLKSQG
VNPKVVKKKAEPLFKRDPKIKAMDIAMITRQIATMLAAGVPIVTTLEMLGRGHEKPKMRE
LLGTIVSDVQAGIPLSDSLRPHKKYFDDLYVDLVGAGEHSGSLDAVFDRIATYREKAEAL
KSKIKKAMFYPAAVVIVAIAVTTLLLLFVVPQFESIFAGFGAELPAFTQMIVGLSRWLQS
SWYFFVIGIIATVWAFRRAHLNSQNFRNRIDELVLKIPVIGDILHKAAMARFARTLATTF
AAGVPLIDGLESAAGASGNYVYRSALTKVRTEVMSGMQMNVAMRTTGLFPDMLIQMVMIG
EESGGLDEMLNKVANIYEMQVDDAVDALSSLIEPMMMVVIGTLVGGLIVGMYLPIFQLGN
VVG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcatcacttgcaaaaacaacgactaaaacaaaaaagcaaaaggcagccaag
gttcaacctaaagttgtcactttcgaatggaagggaaccaatcgtgacggtaaaaaaacc
agtggtgaactgcgcggcacatcatcggcagaaattaaagcccaattaaaatctcaaggg
gttaacccgaaggttgttaagaagaaagctgaaccattatttaaacgtgatccaaaaatt
aaagcaatggacatagccatgatcacccgccaaatagcaactatgctggcggctggtgtt
cccattgttaccacccttgaaatgctggggcgtggacatgaaaaaccaaagatgcgtgag
ttattaggtaccatagtaagcgatgtccaagccggtattcctttatccgactctctaaga
ccccacaaaaaatattttgatgatctctatgtggatttagttggtgcgggtgagcattct
ggctcgctagacgctgtattcgatcgtattgcaacctatcgagaaaaagctgaggcactc
aaatcaaaaattaaaaaagcgatgttttaccctgctgcagtggtaatcgtagccatagca
gttactactttattacttctttttgttgtacctcagtttgaaagcatttttgcgggcttt
ggtgctgagttaccagcttttacacaaatgatcgtgggattatcccgctggttacaatca
tcatggtatttttttgtcattggaattattgcaacagtttgggccttcaggagggcacat
cttaattctcaaaacttccgtaatagaatcgatgaactcgttctaaaaattccagtaata
ggagacatactccataaagcggcaatggcacgctttgcaagaaccttagctacaactttt
gctgctggggtgccactaattgatgggctcgaatctgcagcaggcgcttcaggtaactat
gtctatcgtagcgcactgactaaagttcgtaccgaggtaatgtcgggtatgcagatgaat
gtcgccatgcggaccacaggtctctttcccgatatgcttatccagatggttatgataggt
gaagaatctggtggactcgacgagatgcttaataaagtcgccaacatttacgagatgcaa
gtcgatgatgcagttgacgctttatcaagcttaatagaacctatgatgatggtcgtaata
ggtaccctagtaggtggtttgattgtcggtatgtatcttcctatcttccagttaggcaac
gttgtcggctaa
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