Shewanella spartinae: K0I31_18545
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Entry
K0I31_18545 CDS
T09209
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspa03000
]
K0I31_18545
Transcription factors [BR:
sspa03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0I31_18545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_3
HTH_30
PAS
Mg_chelatase
PAS_4
HTH_22
HTH_7
AAA_2
nSTAND6
MCM
AAA_7
IclR_C
RsgA_GTPase
DUF6030
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QYJ93551
LinkDB
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Position
complement(4285048..4286823)
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AA seq
591 aa
AA seq
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MTIAPQTQAWLSDSWSRSQGAGLSEAKLPQELRLNADALAERHHANKQLINLTKQHALPL
FNQMMAHSQSRLILSDRDGYVLCHWGVSRYSDKLANVALDVGVNWREEHKGTNAIGTALT
ARQTVAVIGEQHFIRHHRFMSCTASPIFSPEGELLGAIDITSEQQRHTQQTLVLIASLVQ
QIETALLCHLPGSHYRIDLAEQASLITSGWQGIVVANVDGKILGCNAMAKRLLHRPRIGD
DIDRHLGASWNSGEQVCQDQRLHLKTQQLVETRPSQLVSQQIGVRFRDPKLERAWQQANK
VVGRNIPLLICGETGVGKEQFVKKLHGQSARAQAALVAVNCAALPADLVESELFGYQAGA
FTGASRQGFEGKIRQADGGFLFLDEIGEMPLATQSRLLRVLQEREVVPVGGNRSYKVDIQ
VVAATHADLRQLVSEGAFREDLYYRLNGLQVSLPPLRQRADIERIIHKLHRRYRQAPQQL
CPQLLRRLLAHDWPGNLRELDNLMQVACLMADGDPELNWQHLPDTLQAQLQGPEQTGEQM
AACESELSLMVNANIVSSFHRFEGNVSRCAKHLGISRNTLYRKLKALGLKP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagctccacagacacaggcttggctgtctgactcatggtctcgtagtcagggc
gcagggttaagcgaagccaagttaccgcaagaattacgactcaacgccgacgcactcgcc
gagcggcatcacgccaacaagcaactcatcaatctcaccaaacagcatgcattgcccctg
tttaatcagatgatggcccacagtcagagccggctgatcctctcggatcgcgacggctat
gtgctctgccattggggcgttagccgctactcggacaagctggccaacgtcgccctggat
gtgggggtcaattggcgcgaggagcacaagggcaccaacgccataggcacggccctgacc
gccaggcagacggtggcggtgatcggcgagcagcacttcatccgtcaccacagatttatg
agctgcaccgccagccccatcttctcccccgagggagaactgctcggcgccatcgacatc
accagcgagcagcagcgtcacacccagcagaccctggtgctcatcgccagcctggtgcaa
cagatagagacggcgctcttgtgtcatctgcccgggagtcactaccgcatcgatctcgcc
gagcaggcgtcgctgatcacctcaggctggcaggggatagtggtggccaatgtcgacggc
aagatcttaggctgcaacgccatggccaagcgtctgctacacaggccgcgcatcggcgac
gatatcgaccgtcacctgggtgcaagctggaacagcggcgagcaggtgtgtcaggaccaa
cgtctgcacctcaagacccagcagctggtcgaaacccggccaagccagctggtgagccag
cagataggcgtgcgttttcgcgaccctaagctagagcgcgcctggcagcaggccaacaaa
gtggtggggcgcaatattcctctgcttatctgcggcgagacaggggtgggcaaggagcag
tttgtgaagaaactccatggtcagagtgcccgcgcccaggcggcgctggtggcggtcaac
tgcgccgcgctgcccgccgatctggtggagtctgaactcttcggctatcaggccggggcc
ttcaccggcgcctcccgtcaggggttcgagggcaagatacgtcaggccgacggcggcttt
ctgtttctcgacgagataggcgagatgccgctggcgacccagagccgtctacttcgggtg
ctgcaggagcgcgaggtggtgcccgtgggcggtaatcgcagttacaaggtggatattcag
gtggtggccgcgacccacgcggatctgcgccagctggtgagtgagggagcatttagggag
gatctctactatcgcctcaacggcctgcaggtgtcgctgccgcccctgcgtcagcgcgcg
gatatcgaacgcatcattcacaagctgcataggcgctatcgccaggcgccgcagcagctc
tgccctcagctactgaggcgactgttggcccacgactggccgggcaacctgagggagctg
gacaacctgatgcaggtggcctgcctgatggccgatggtgatcccgaacttaactggcag
catctgcccgacaccctgcaggcccagctgcaggggcctgagcagacgggcgagcagatg
gcggcctgcgagagtgagcttagcctgatggtcaacgccaatatcgtctcaagcttccac
agatttgagggcaacgtcagtcgctgtgccaaacacttagggatcagccgcaataccttg
tatcgaaagctcaaggccctggggctcaaaccctga
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