Shewanella spartinae: K0I31_18875
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Entry
K0I31_18875 CDS
T09209
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
K0I31_18875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
HHH_6
RuvX
T2SSK
Ins_allergen_rp
Motif
Other DBs
NCBI-ProteinID:
QYJ93614
LinkDB
All DBs
Position
complement(4351168..4353531)
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AA seq
787 aa
AA seq
DB search
MQNIAQIIAQELNVREQQVTATITLLDDGATVPFVARYRKEVTGGLDDTQLRTLYSRLGY
LRELNDRRQVILSSIQAQGKLTAELQAAIDQADSKTRLEDLYLPYKPKRRTKGQIAIEAG
IEPLVDRLLSDRQADIEALASEYLNADAGFDEVKAVLDGARFILMERFAEDAELLQKVRQ
HLTQSAVLESHVVKGKEKEGAKFRDYFEHSEKLMNVPSHRALAMLRGRNEGVLSLSMNAD
PDSEAKSGSYCEVIIADHFNLKLSDSAVDQWLKLVVTSTWRIKIALQMETEFIAKLRERA
ETEAINVFARNLGDLLMAAPAGAKATLGLDPGLRTGVKVAIVNNTGKLMAHTTIFPHAPQ
NQWDKSIRTLANLVKMHKVELIAIGNGTASRETDKLAGELIAELKSELPTLTKIMVSEAG
ASVYSASELAAEEFPELDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQL
SQSLEAVVEDCVNGVGVDLNMASMPLLTQVAGLNKTLARNIVEYRDQNGQFTSRKQLLKV
PRLGPKAFEQAAGFLRIREGDNPLDASAVHPETYALVESIAKAQQQAVDALIGNTDLLKQ
IDAKAFVTEEFGLPTIEDILSELDKPGRDPRGEFKTAVFKEGVEEIKDLKVEMILEGVVT
NVTNFGAFVDIGVHQDGLVHISSLTDKFVSDPHTVVKAGDVVKVKVMEVDAERKRISLTM
RLDEKPGEKQMSHQGGKGQAKAGQGKGHQGKGSQGKSQAKGQYKQPKAPANAAMGNAFAD
AFAKLKK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatattgcacaaatcatcgctcaggaacttaatgttcgtgagcagcaagtgacg
gcaactatcactctattggatgacggcgcgacggttcccttcgtggcgcgttatcgtaaa
gaggtcacaggtggtttagacgatacccaactgcgcactctgtatagccgcctgggctat
ctgcgcgaactcaacgatcgccgtcaggtgatcctctccagcattcaggcccagggtaag
ctgaccgccgagctgcaggccgccatagatcaggccgacagcaagacacgcctggaagat
ctctatctgccctacaagcctaagcgtcgtaccaaggggcagatcgccatcgaggccggt
atcgagcccctggtggatcgtttgctgagtgatcgtcaggcagatatcgaggccctggcg
agcgagtacctcaatgccgatgcgggtttcgatgaggtgaaggcggtgctcgatggtgcg
cgctttatcctgatggaacgtttcgccgaagacgccgaactgctgcagaaggtgcgccaa
cacctgacccagagcgccgtgctcgagagccatgtggtgaagggcaaggagaaagagggc
gccaagttcagagactatttcgagcacagcgagaagctgatgaatgtgccttctcatcgt
gccctggccatgttgcgtggtcgcaacgagggcgtgttgagcctgagcatgaatgccgac
ccagacagcgaggccaagtcaggcagttactgcgaggtgattattgccgatcactttaac
ctcaagctgagtgattccgccgtggatcagtggcttaagctggtggtcacctctacctgg
cgcatcaagatcgcgctgcagatggagacagagtttatcgccaagctgcgcgagcgtgcc
gagacagaggcgatcaatgtcttcgcccgcaacctgggcgatctgctgatggcggcgcct
gccggtgccaaggccacactgggcctggacccaggattgcgaaccggcgtcaaggtggcc
atagttaacaacacgggcaagctgatggcccacaccaccatcttcccccatgcaccgcag
aaccagtgggataagtcgatccgtaccctggcgaacctggtgaagatgcataaggtggag
ctgatcgccataggcaacggcaccgcctcacgtgagacagacaagctggcgggcgagctg
attgccgagctgaagagcgagctgccgacactcaccaagatcatggtgagcgaggcgggc
gcctcagtctactctgcctctgagctggcggcggaggagttccccgagctggacgtgtcg
attcgcggcgccgtctctatcgcccgtcgcctgcaggatccgctggcggagctggtgaag
atcgagcctaagtctatcggcgtgggccagtatcaacatgacgtgagtcagagtcagctg
tcacaatccctcgaggccgtggtggaagattgtgtaaacggcgtgggtgttgatctcaac
atggcctctatgccgctgctgactcaggtggccggcctgaacaagacgctggcgcgcaat
atcgtcgagtaccgcgaccagaatggtcagtttacctcgcgtaaacagctgcttaaggtg
ccacgtctcggccctaaggcgttcgagcaggcggccggtttcctgcgtattcgtgagggt
gacaacccgctggatgccagcgcagtgcatccagagacctatgccttggttgagtctatc
gccaaggcgcagcagcaggcggtggatgccctgataggcaacacagatctgctcaagcag
atcgatgccaaggcgtttgtgaccgaggagtttggtctgccgaccatagaagatattctc
agcgagctggataagccgggtcgtgatccccgcggcgagtttaagactgccgtgtttaag
gaaggggtcgaggagatcaaagatcttaaggtcgagatgatcttagagggcgtggtgacc
aatgtgaccaacttcggcgccttcgtcgatattggcgtgcatcaggatggactggtgcat
atctcgtcgctcaccgacaagtttgtcagcgatccccacacagtggtgaaggccggtgac
gtggtcaaggtcaaggtgatggaggtcgatgccgagcgtaagcgtatcagcctgaccatg
cgtctggacgagaagccgggcgagaagcaaatgtctcaccaaggtggcaagggccaggcg
aaagcgggtcaaggcaaaggacatcaaggtaaaggctcacagggcaagagccaggctaag
ggtcagtataagcagcccaaggcaccggctaacgcggccatgggtaatgcctttgccgat
gccttcgccaagctgaagaagtaa
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