Shewanella spartinae: K0I31_19260
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Entry
K0I31_19260 CDS
T09209
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sspa
Shewanella spartinae
Pathway
sspa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0I31_19260 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspa03400
]
K0I31_19260 (mutM)
Enzymes [BR:
sspa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K0I31_19260 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K0I31_19260 (mutM)
DNA repair and recombination proteins [BR:
sspa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0I31_19260 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QYJ93682
LinkDB
All DBs
Position
4440517..4441332
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVEVTRQGISPHLLDQQVTGLTVRNASLRWPVPEVAQQIVGQTIRGIRRRAKYLL
LDTDAGTTIVHLGMSGSLRILPKSTPVEKHDHIDLELASGKVLRFNDPRRFGAWLWCELP
EAAHPLLAKLGPEPLQSGFNVDYLAKALEGKKKAVKLCLMDNHIVVGVGNIYANEALFAA
GIHPQAEAGRIDRERLTVLVAEVKQILTQAIKQGGTTLKDFTNAEGKPGYFAQKLHVYGR
GGETCTQCGNLLSEIKLGQRATVFCGLCQPR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactcccagaagtcgaagtgacccgccaagggatctcccctcacctgctcgat
cagcaggtcacaggattaactgtgcgtaacgcctccctgcgctggcccgtccccgaggtt
gcccagcagatagtcggacagaccatcagaggtatacgtcgccgcgccaaatacctgctg
ctggataccgatgccggcaccaccatagtccacctcggcatgtccggcagcctgcgaatt
ctgcccaagtctacgccggtggagaagcatgaccatatcgatttggaactggccagcggc
aaggtgctcaggtttaacgatcccagacgcttcggcgcctggctctggtgcgagctgccc
gaagccgcccaccccttgctggccaagctaggcccagaacccctgcaatcgggcttcaat
gtcgactatctggccaaggccctggaaggtaagaagaaggcggtcaaactctgcctgatg
gacaatcatatcgtggtgggcgtagggaatatctatgccaacgaagccctgtttgccgcc
ggcatacacccacaggccgaggcgggacgaatcgatagggagcggctcacggtactggtt
gccgaggtgaaacagatcctgacccaggcgatcaaacagggtggcaccacgctcaaagac
ttcaccaacgccgagggcaaacccggttatttcgcccagaagctgcatgtctatggccgc
ggcggcgagacctgcacccaatgcggcaatctgctgagcgagatcaaactgggccaaagg
gccaccgtcttctgcggcctgtgtcagccacgctaa
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