Shewanella spartinae: K0I31_19380
Help
Entry
K0I31_19380 CDS
T09209
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sspa
Shewanella spartinae
Pathway
sspa03030
DNA replication
sspa03410
Base excision repair
sspa03420
Nucleotide excision repair
sspa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0I31_19380 (polA)
03410 Base excision repair
K0I31_19380 (polA)
03420 Nucleotide excision repair
K0I31_19380 (polA)
03440 Homologous recombination
K0I31_19380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspa03032
]
K0I31_19380 (polA)
03400 DNA repair and recombination proteins [BR:
sspa03400
]
K0I31_19380 (polA)
Enzymes [BR:
sspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0I31_19380 (polA)
DNA replication proteins [BR:
sspa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K0I31_19380 (polA)
DNA repair and recombination proteins [BR:
sspa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K0I31_19380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0I31_19380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QYJ93706
LinkDB
All DBs
Position
4464783..4467533
Genome browser
AA seq
916 aa
AA seq
DB search
MPNIAENPLILVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYKPTQMAV
VFDAKGKTFRNEMYAEYKAHRPPMPDDLRTQIEPLHRIIRALGLPLVCIPGVEADDVIGT
IARQASQEGRAVLISTGDKDMAQLVDDKITLINTMTNTILGPDEVSEKFGVGPELIIDLL
ALQGDKADNIPGLPGVGEKTALAMLQGVGGVDAILANPEKIPELGFRGAKTMPAKIAEHG
DMLKLSYELATIKCDVELQQDWHQLNIQDADRDELIKCYGEMEFKRWLAEVLDNKSSVDS
QEEADEAPAPQTIDTQYDTILTWEALDEWLKALAAAPLFALDTETTSLNYMEAKLVGLSF
AIEPGKAAYLPLAHDYADAPEQLDSEQVLAKLKPLLEDPSLLKVGQNLKYDMSILANVGI
SLKGVAFDTMLESYVFNSVASKHNMDDLALKYLGHKNISFEEIAGKGVKQLTFNQIPLET
AAPYAAEDADITLRLHQHLWPRLQKASELASVFTDIELPLVSILSQIERQGVLIDSMLLG
QQSDELARKIDELEQKAYEIAEEPFNLGSTKQLQALFFEKLGYPVLKKTPKGAPSTAEEV
LVELALDYPLPKIILEHRSLSKLKSTYTDKLPLMVDGKTGRVHTSYHQAIAATGRLSSSE
PNLQNIPIRTEEGRRIRHAFVAPEGRKILAADYSQIELRIMAHLSQDKGLLSAFAEGKDI
HRATAAEVFDVDFSEVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRHEAQQYIDIYFK
RYPGVLKYMEDTRAAAAEQGYVSTLYGRRLYLPAIKDRNAMRRQAAERAAINAPMQGTAA
DIIKKAMINIAQWIETETQGEITMIMQVHDELVFEVDADKADSLKLKVCELMAQAASLDV
ELLAEAGIGDNWEQAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatatcgctgaaaacccactcattcttgtggatggttcttcctatctttaccgc
gcctactatgcgccgccccacctgaccaactccaagggtgaggccacgggtgccgtgtat
ggcgtgatcaacatgctacgcagcctgctcaaccaatataagccgacccagatggctgtg
gtgttcgatgccaagggaaaaaccttccgcaatgagatgtatgccgaatataaggcccac
agaccccccatgccggacgatctcaggacacaaatcgaaccgctgcatcgcatcattcgc
gcattggggcttcccctggtctgtattcccggcgtcgaggccgatgatgtcataggcacc
atcgccagacaggccagccaggaaggccgcgccgtgctgatcagcacaggcgataaagat
atggcgcagttggtggatgacaagatcaccctgatcaacactatgaccaacaccatccta
ggccccgatgaggtgagcgagaagtttggtgtcggccctgagctgatcatcgatctactg
gcactgcaaggcgataaggcagataacatccccggcctgccaggcgtgggtgagaagacg
gcgctggctatgctacaaggcgtaggcggcgtcgacgccatcctcgccaacccagagaag
ataccggagctcggttttaggggcgctaagaccatgcccgccaagatcgccgaacatggc
gacatgctcaaactctcctatgagctggcgaccatcaagtgcgatgtcgaactgcaacaa
gactggcaccagctcaacattcaagacgcggatcgcgacgagctgatcaaatgctacggc
gagatggaatttaagcgttggctggccgaggtgttagacaacaagtcgagcgtcgacagc
caagaagaggccgacgaagcgccggcgcctcagacgatcgatacccagtacgacaccatt
ctgacctgggaagccttagatgagtggctaaaggccctggccgccgcaccgctatttgcc
ctggatacagaaaccaccagcctcaactacatggaggccaaactggtggggctctcgttt
gccatcgaaccaggcaaggccgcctacctgccgctggcacacgattatgccgatgcccca
gagcagctcgacagcgagcaggtactagccaagctcaagccactgctggaagaccctagc
cttctcaaggtgggacagaaccttaaatatgacatgagcatattggccaatgtcggcatc
tccctcaagggagttgccttcgataccatgctcgagtcctatgtatttaactcggtcgcc
tccaagcacaacatggatgacctggcgctgaaatacctgggtcacaagaatatcagcttc
gaagagatcgccggcaagggcgttaagcagctgaccttcaaccagatcccgctggaaacg
gcggccccttacgccgctgaagacgctgacatcacactcaggctgcatcagcatctttgg
ccgagactgcaaaaggccagcgagcttgccagcgtctttaccgacatagagctgcctctg
gtcagcatcttgtcgcaaatcgaacgtcagggcgtgttaatcgacagcatgctgctgggc
cagcagagcgacgagctggcacgcaagatagatgagctggagcagaaggcctacgagatc
gctgaagagccctttaacctaggctcgaccaaacagctgcaggccctcttcttcgagaaa
ctgggttacccagtattgaagaagacccctaagggcgcaccgtccaccgccgaagaggta
ctggttgaactggccctggactacccactgcccaagatcatcctggagcacaggagtctg
tctaagcttaagagcacctacacagacaagttgccgctcatggtcgatggtaagactggc
cgggtacacaccagctaccaccaggccatcgccgccacgggtcgcctgtcatccagcgag
cctaacctgcagaatatccccatccgcaccgaggagggccgccgtattcgtcacgccttc
gtggcgccagagggacgcaagatcctcgcagccgactattcgcagatcgagctgaggatc
atggcccacctctcccaggataagggcctgctgagtgccttcgccgagggcaaagatatt
catagagccaccgccgccgaggtgtttgacgtcgacttcagtgaagtcaccagcgaacaa
cgtcgccgcgccaaggcggtgaactttggtctcatctatggcatgtcggccttcggtctg
gcccgccagctggatattccgcgccacgaggctcagcaatatatcgacatctacttcaag
cgctatcctggcgtgctcaagtatatggaagatacccgcgctgccgccgccgagcaggga
tacgtatcgaccctctatggtcgcaggctctatctaccggccatcaaggatagaaacgcc
atgcgccgtcaggcagcggagcgcgcagcgatcaacgcgccgatgcagggcacggctgcc
gatatcatcaagaaggccatgatcaatatcgctcagtggatcgagacagagacacaggga
gagatcaccatgatcatgcaggttcacgatgaactggtgtttgaggtcgacgccgacaag
gccgattcgctcaaactcaaggtgtgtgaactgatggcgcaggccgcctcgttagatgtc
gaactactggccgaggctggtatcggcgataactgggaacaggcgcactag
DBGET
integrated database retrieval system
