Streptomyces spectabilis: CP982_19605
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Entry
CP982_19605 CDS
T07323
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sspb
Streptomyces spectabilis
Brite
KEGG Orthology (KO) [BR:
sspb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspb03016
]
CP982_19605 (thpR)
Enzymes [BR:
sspb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CP982_19605 (thpR)
Transfer RNA biogenesis [BR:
sspb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CP982_19605 (thpR)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
DUF6292
Motif
Other DBs
NCBI-ProteinID:
QEV60654
UniProt:
A0A5P2XAF2
LinkDB
All DBs
Position
complement(4538380..4538943)
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AA seq
187 aa
AA seq
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MRLFVAVLPPEPVVAELSGRVDDLKRLPGADALRWTERAGWHLTLAFLDEVDDRVVPDLT
ARLARAAGRTAPFPLALRGGGRFGDRALWAGVAGGVAELRLLAGRAEAAGRRAGAGPEAG
RGFHPHLTLARARGAADLVPFVEGLSGFEGVEWEVRELSLVRSHLPRGGEPGARPRYEPL
AGWALRG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgtggcggtgctgcccccggagccggtggtggccgaactctccgggcgc
gtggacgacttgaagcggctgcccggggcggacgcgctgcgctggacggagcgggccggg
tggcatctgaccctggcgttcctcgacgaggtcgacgacagggtcgtgcccgacctcacc
gcccggctcgcgcgggcggccgggcgcaccgcgcccttcccgctcgcgctgcgcgggggc
gggcggttcggggaccgcgcgctgtgggcgggggtggccgggggcgtggcggagctgcgg
ctgctcgcgggccgcgcggaggcggccgggcgccgggccggggccggtcctgaggcgggg
cgggggttccatccccatctgaccctggcgcgagcgcggggggccgcggatctggtgccc
ttcgtggaggggctttcggggttcgagggggtggagtgggaggtgcgggagctttcgctg
gtccgcagccacctgccccggggcggggagcctggagcgcggcctcgctacgagcccttg
gccgggtgggccttgcgcggctga
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