Streptomyces spectabilis: CP982_25180
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Entry
CP982_25180 CDS
T07323
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sspb
Streptomyces spectabilis
Pathway
sspb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sspb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP982_25180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspb03021
]
CP982_25180
03400 DNA repair and recombination proteins [BR:
sspb03400
]
CP982_25180
Enzymes [BR:
sspb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP982_25180
Transcription machinery [BR:
sspb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP982_25180
DNA repair and recombination proteins [BR:
sspb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP982_25180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
QEV61590
UniProt:
A0A5P2XF46
LinkDB
All DBs
Position
5715545..5719444
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQIENRRDADLEGRAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDVKGE
GRAFGSTAEAIMAFDAGELALQSSVDIRFPVGTIPPRGWVPPVAEEGEQEYQQGDSFRLR
TSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWAT
RSGVTVAISDVVVPEAKKEIVAGYEAQDEKVQKQYERGLITKEERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLKIAIRG
EDGVLRKTENVETSVYARMLAEDVVIDGKVIAPANVDLGDVLIDALVANSVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKLVVTPDDGSDETAFPISKRARL
LVGEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggtaagtacaagcgtgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggtgtcccgtcgcgcctgggctacctgctcgacctc
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gaggagcgccgcacgcgcgatctgccctccctggaggcgcacgtctccgtggagcgtcag
cagatcgagaaccgccgcgacgccgacctcgaaggccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggc
gccgagcgcgagatgaagcagctgcgcgaccgcgcgcagcgcgagatcgaccgtctggac
gaggtctggtcgcgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagacctcgaacagccccaagggcatggttctggactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcgccttctcgacctc
ggtgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgtcgtggtcgcccggtcaccggtcccggcaaccgccccctgaag
tccctcagcgacatgctgaagggcaagcagggtcgcttccgtcagaacctcctcggcaag
cgcgtggactactccgcgcgttccgtgatcgtcgtgggtccgcagctgaagctgcaccag
tgcggtctgcccaaggccatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcggatggtcgagcgcggccgc
acggtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgccgacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacgcaggac
atggtcctgggtctgttcttcctcaccaccgacggtgagctgcgtgacgtcaagggcgag
ggccgtgcgttcggctccaccgccgaggcgatcatggcgttcgacgcgggcgagctcgcg
ctccagtcgtccgtcgacatccgcttcccggtgggcaccatcccgccgcgtggctgggtg
ccgccggtcgccgaggagggcgagcaggagtaccagcagggcgacagcttccggcttcgc
acctccctgggccgtgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactccgtcggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggcgggcttctactgggcgacc
cgttccggcgtcaccgtggccatctccgacgtcgtggtccccgaggccaagaaggagatc
gtcgcgggctacgaggcccaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggaagagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgcgaacttccccaagaccaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcggcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcctccttccgtgagggcctctcc
gtgctcgagtacttcatctcgacccacggtgcccgtaagggtctggcggacacggccctt
cgtaccgccgactccggttacctcacccgtcgtctggtcgacgtctcccaggacgtgatc
attcgcgaggaggactgtggcaccgagcgcggtctgaagctgaagatcgcgatccgcggc
gaggacggcgtgctccgcaagacggagaacgtcgagacgtccgtgtacgcccgcatgctg
gccgaggacgtcgtcatcgacggcaaggtcatcgcgccggccaacgtcgacctcggtgac
gtcctgatcgacgccctggtcgccaacagcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtcggcggtcggcacctgtgccttctgctacggccgctcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgtgtcgtcgagctcttcgaggcccgtacgccgaagggtgtcgccccg
atctccgaggccgcgggccgggtccgcatcgaggagaccgagaagaccaagaagctcgtc
gtcaccccggacgacggcagcgacgagacggcgttcccgatctcgaagcgtgcccgtctc
ctggtgggcgagggcgaccacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctccggatcctcggccagcgcgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctccgccgcgtgacgatcatcgagtccggcgacgcggagctgcttccg
ggcgagctcgtcgagcgctcgaagttcgagaccgagaaccgtcgtgtggtcaccgagggc
ggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcctcgctcgcgacg
gagtcctggctgtcggccgcctccttccaggagacgacccgagtcctgacggatgcggcg
atcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctgtcccgttaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
acgggctccggccaggccgttccgctggaggactacgactacggtccctacaaccagtag
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integrated database retrieval system
