Streptomyces spectabilis: CP982_30780
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Entry
CP982_30780 CDS
T07323
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sspb
Streptomyces spectabilis
Pathway
sspb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP982_30780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspb03019
]
CP982_30780
03400 DNA repair and recombination proteins [BR:
sspb03400
]
CP982_30780
Enzymes [BR:
sspb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP982_30780
Messenger RNA biogenesis [BR:
sspb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP982_30780
DNA repair and recombination proteins [BR:
sspb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP982_30780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
PglZ_C
DUF8096
Motif
Other DBs
NCBI-ProteinID:
QEV62565
UniProt:
A0A5P2XHD7
LinkDB
All DBs
Position
complement(6990634..6992823)
Genome browser
AA seq
729 aa
AA seq
DB search
MSNEDLRTAADAVLARLVGGSSPASDGTRPPDGPRLREDQWRAIEALVAEKRRALVVQRT
GWGKSAVYFVATALLRERGSGPTVIVSPLLALMRNQVESAARAGIRARTINSSNTEEWDT
IQAEVAAGDVDVLLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDWGHDFRPDYR
RLRTMLAELPPGVPVLATTATANARVTADVADQLGTGGGSDALVLRGPLDRESLSLGVLQ
LPNAAHRLAWLADHLDDLPGSGIIYTLTVAAAEEVTAYLRQRGHVVTSYTGKTENVDRQQ
AEEDLLANRVKALVATSALGMGFDKPDLGFVIHLGSPSSPIAYYQQVGRAGRGVDHAEVL
LLPGQEDTAIWNYFASLAFPPEEQVRRTLDVLAQAGRPLSLPALEPLVELRRSRLETMLK
VLDVDGAVRRVQGGWIATGTPWTYDTERYAWVAKQRQAEQQAMREYASTTSCRMEFLRRQ
LDDEEAAPCGRCDNCAGGRFDDAVSSTALDSARGELARPGVEVEPRKMWPTGLAAVGMTL
KGRIPAGEQASSGRALGRLSDIGWGNRLRPMLAPQAPDVPVPDDVTKAVVEVLADWAKGP
GGWATGAPDAGPRPVGVVTMPSRSKPQLIQSLGARIAEIGRLPLLGSLEYAAEATDVRVP
RSNSAQRLRALDGSLIVPPALASAIQEADGPVLLVDDATETGWTLAVSARMLRRAGAKGV
LPLVLAVQG
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaagacctgcgcacggcggccgacgccgtcctcgcccgcctcgtcggcggt
tcctcccccgcgtccgacgggacgcggccgccggacggcccgcgcctgcgcgaggaccag
tggagagccatcgaggcgctggtcgccgagaagcggcgcgcgctcgtcgtacagcgcacc
ggctggggcaagtcggcggtgtacttcgtcgcgaccgcgctgctgcgggagcgcggcagc
ggtccgaccgtgatcgtctctcctctgctcgcgctcatgcggaaccaggtcgagtcggcg
gcgcgggcaggcatccgcgcccgcacgatcaactcgtcgaacaccgaggagtgggacacc
atccaggccgaggtggccgcgggcgacgtcgacgtgctgctcgtgagcccggagcggctc
aacaacccggacttccgcgaccaggtcctgcccaagctcgccgcggcgaccggcctgctg
gtggtcgacgaggcccactgcatctccgactggggccacgacttccggcccgactaccgc
cggctgcgcaccatgctggccgaactgcctcccggcgtcccggtcctggccaccacagcc
acggccaacgcgcgcgtgaccgcggacgtcgccgaccagctcggcaccggcggcgggtcg
gacgccctcgtcctgagagggccgctcgaccgggagagcctgagcctcggcgtgctccag
ctgccgaacgcggcgcaccgtctggcctggctcgcggaccacctcgacgacctccctggc
tccgggatcatctacaccctcacggtcgccgccgccgaggaggtgaccgcgtacctccgc
cagcgcggccacgtcgtcacctcgtacaccggcaagacggagaacgtggaccggcagcag
gcggaggaggatctgctcgccaaccgcgtgaaggccctggtcgccacctccgcgctcggg
atgggcttcgacaagcccgacctcggtttcgtgatccacctcggctccccctcctcaccg
atcgcctactaccagcaggtgggccgcgcggggcgcggtgtcgaccacgcggaggtgctg
ctcctgcccggccaggaggacacggcgatctggaactacttcgcttccctggccttccct
cccgaggagcaggtgcgtcgcaccctggacgtgctcgcccaggcgggccgccccctgtcg
ctgcccgccctggagccgctggtcgagctgcgcagatcacggctggagacgatgctcaag
gtgctcgacgtcgacggcgcggtgcggcgcgtgcagggcggctggatcgccaccggcaca
ccgtggacgtacgacaccgagcgctatgcctgggtcgccaagcagcggcaggccgaacag
caggccatgcgtgagtacgcatcgaccacgtcctgccgcatggagttcctgcgccgccag
ctggacgacgaggaggccgcgccgtgcggccgctgtgacaactgcgcggggggccgcttc
gacgatgccgtctcctccacggctctggactcggcgcggggcgagctcgcccggcccggt
gtggaggtcgagccccgcaagatgtggcccaccggactcgccgccgtgggcatgaccctc
aagggccgcatccccgccggcgagcaggcctcttcggggcgtgctctggggcgcctgtcg
gacatcggctggggcaaccgcctccgcccgatgctcgcaccgcaggcgccggacgtcccg
gtgcccgacgacgtcaccaaggccgtggtggaggtgctggccgactgggccaagggtccg
ggtggctgggcgacgggtgcccccgacgccgggccccgccctgtgggcgtggtgacgatg
ccgtcccgctcgaagccccagctgatccagtcactcggggcacggatcgcggagatcggc
cgccttccgttgctcggttcgctggagtacgccgccgaggccacggacgtacgcgtgccg
cggagcaacagcgcccagcgtctgcgcgccctggacggctccctgatcgtgccgcccgca
ctggcctcggcgatccaggaggcggacggccccgtgctcctcgtcgacgacgcgacggag
accggctggacgctcgcggtgtccgcgcgcatgctccgacgggcaggggcgaagggggtg
ttgccgctggtcctggccgtgcaggggtga
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