Schlesneria sphaerica: ACGY09_00530
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Entry
ACGY09_00530 CDS
T11240
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sspe Schlesneria sphaerica
Pathway
sspe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACGY09_00530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspe03019
]
ACGY09_00530
Enzymes [BR:
sspe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACGY09_00530
Messenger RNA biogenesis [BR:
sspe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACGY09_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XJS16063
LinkDB
All DBs
Position
complement(165845..167164)
Genome browser
AA seq
439 aa
AA seq
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MSFSDLGLCQPILNAVKAEGYETPTPIQAQAIPHALAGRDLFGCAQTGTGKTAAFSLPIL
HRLVEAGVPSAKVRRPIRALILAPTRELAIQIADCILAYSQNTHIRHTLVFGGVSQVPQV
RALQRGIDIVVATPGRLCDLIGQGHVDLSHVETFVLDEADRMLDMGFIHDIRHIAERVPK
ARQTLFFSATMPREIRELSTSLLSNPVTVEITPVATAAETVQQSVFMIPQSNKPRLLQTL
LTMPEIARALVFTRTKHGADKVLRHLMQAGIRADTIHGGKSQAKRQRALADFKSNRLQVL
VATDIAARGIDVDGITHVINYDLPAEIESYVHRIGRTGRAGAKGIAMSFCDPTERSKLRA
IERAIRQPIEVAKTPNLVIAPVAAIKHDFETREPHRPARPTDGTNGMPPRRPQGAMGDRR
PGQGSRAGGPPRRRDYSSR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttttctgatctcgggctttgtcagcccattttgaatgcagttaaagcagaaggt
tatgaaacccctacgccgatccaggcacaggcaatcccgcacgcgttagcaggacgcgac
cttttcggatgcgcccagacgggtactggcaagacggccgcattctccttgccaattctc
catcgattggtggaagctggcgttccttcagcgaaggttcgtcgtccaattcgggcgctg
attcttgcccccactcgagaattggcaatccagattgccgactgcattctggcctacagc
cagaacacccatattcgtcacacgctggttttcgggggtgtcagtcaggttccgcaggtg
cgcgctctgcagcgcggaatcgatattgtcgtcgctaccccgggacgattgtgtgacctg
atcgggcagggtcatgtcgacctcagccacgtcgaaacattcgtgctcgacgaagcagat
cgaatgctcgacatgggcttcatccacgatattcgtcacatcgccgaacgagttcccaaa
gctcgacagacgttattcttttcggccacgatgccgcgagaaattcgcgaactgtcaacc
tcgttgctgagcaatcccgtcacggtcgaaattacgcccgttgcgactgctgcggaaaca
gtccagcaatcggtgttcatgattccgcaatcaaacaagccacgtctgcttcagacgctg
ctgacgatgccggaaattgctcgagctctggttttcacccgtaccaagcatggcgccgac
aaggttctgcgtcacttgatgcaggcgggaattcgggccgacacgatccacggcggcaag
tcacaagccaaacgccagcgcgccttggcggacttcaagtcgaaccgactgcaagtgctg
gtcgcaaccgacatcgccgctcgcggaattgatgtcgacgggatcacccacgtgatcaac
tatgacctgccagccgaaatcgaatcgtacgtccaccgaatcggacgaacgggtcgagca
ggcgcgaaggggatcgcgatgtccttctgcgatccaaccgaacgatccaaactgcgagcc
attgagcgagcaatccgccagccgatcgaagtcgccaagacgccaaacctggtgattgct
cctgttgctgcaatcaagcacgactttgaaacccgtgaaccgcaccgtccagcacgtccg
accgatgggacgaacgggatgcccccacggcgaccccaaggggcgatgggtgatcgacgc
cctggccaggggagtcgggcaggtggtcccccccgccgccgggattacagcagcaggtaa
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