Schlesneria sphaerica: ACGY09_13775
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Entry
ACGY09_13775 CDS
T11240
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sspe Schlesneria sphaerica
Brite
KEGG Orthology (KO) [BR:
sspe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspe03400
]
ACGY09_13775
Enzymes [BR:
sspe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACGY09_13775
DNA repair and recombination proteins [BR:
sspe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ACGY09_13775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD-helicase
UvrD_C
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
XJS13674
LinkDB
All DBs
Position
complement(3797021..3800437)
Genome browser
AA seq
1138 aa
AA seq
DB search
MTQFTIIAGCAGAGKTERLLKTYGAALERARSEGRFGTCLWLSPTQRIQKSIVRQVVARQ
GAVCFSPNILTFDQFARKILESEGVPDSPISPVMKRLLIRRIASGLQDQGELRYFRPIAG
TTGFLDIVSNFISELKREEIWPEEFVAACRKRKSSFARRDLEIGLIYSRYQEQLAQQNWY
DNEGRFWLARNALDRGARGEFANVGQVVVDGFADFTQTQYEILGILSRWIDQIIVALPVE
PTTTRPNLFSKPSAAIQRIREQLDAQAKFQLEWLAASAATAGTVGSEVGAADAGTGRLQR
AKSVQVIADRLFSNPRFLQPSSEADGLEIIAATGPASEWEGVAHRIKALLRSGREESGTV
IDHGANPGSVQPQDIVIGLRTITDDGPRLRDFLRSAGLPVWCETEVPFTASPMVRAVSSL
LQLELEDWPYERLLSVLDSSFFQPNWPELASNRGVRVVAAVLRQLQLGGGRETILRVVGR
AAGEPASDPVAEERSATAAARVALPLLTRLSRSLDQLRRSHTLADWADVLASIGEDLGWT
RRHLNADDALAVSESRDWDLLQRILRTAAEADQKLSEGGRARSMKLPEFCAEMSDLLSHE
TLKAEIEPGGSIRILGMEQIRNLDIPHLFLLGMTENSFPMSRSDDCLFSEAERREFNEHG
VILRHRSSHQADEMFLFYSVVTRARKSLTLSYPAVNLKGQPVFSSPYVTALTTLFTKGAF
VETYEGQLNPVPTVDRALTPTDVRLAAMVQAHTGHPELFRAVLEWEPLRKTAFNSLAACD
VAHHRFHQHGFTPYEGRLELPQNQALLQHRFGSRHQFSATELEAYAKCPFQFWLSTVLRI
APVDSPEEGTDFAARGTLLHDVLAELLKEGFAEDRDALRSRFHELVSTQLDRRIPDTELQ
RALIEVERLILLRWGDAFAEQHTSYAEQIGNVFRRIESLPPEIPFGRLPDAPVSDDQSNP
EIRFGNEETGVKVRGRIDRVDCGTIEGQNAFLVIDYKTGQRPSLKREDMISGRSIQLALY
LIAVRRLGLVAPDAVPFQMGYWALKETGYKPGLTKKLKNFAPLEEAVVKSLDVLLDDLLP
RLAEGIRSGNFIVENNDDNCTGHCQYRTVCRVNQLRPLAEALGKRSPAPVDPCPIADE
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgactcaattcactatcatcgcgggttgcgctggagcggggaagaccgagaggctgctg
aagacttatggggccgctctggagcgggcccggtctgaggggcggttcgggacctgcttg
tggctttcgccgacgcagcgaattcagaaatcgatcgttcggcaagttgtcgcccgccag
ggtgcggtttgcttctcaccgaatattctgacgttcgatcagttcgcacgaaagattctg
gaatcggaaggcgtgccggactcgccgatctcgccggtgatgaagcggctcttgatccgc
cggattgccagtggcttgcaggatcagggcgaactacgctacttccgcccgatcgccggg
acgaccggttttctggatatcgtttccaacttcatcagcgaactgaaacgggaagaaatc
tggcctgaggaatttgtcgcggcctgccggaaacggaaatccagtttcgcgcgtcgcgat
ctggaaattggactgatttactcccgctatcaggaacaacttgcacagcagaactggtac
gacaacgaaggccgcttctggctggctcggaatgcgttggatcggggagctcggggtgag
tttgcgaatgtcggacaggtggtcgtcgacggcttcgcagacttcacgcagacgcagtat
gagatcctgggaatcctgtcgaggtggatcgatcagatcattgtcgccctacccgtcgaa
ccaacgacaactcgtccaaacctgttctctaaaccctctgcggcaatccagcggatccgc
gagcaactcgacgcccaggcgaagtttcaactggaatggctggctgcttcagcagccaca
gcgggcacagttggttctgaggtgggtgctgctgatgcaggaacaggtcgactgcagcgg
gcaaaatcggttcaagtcattgctgaccgactgttctcgaacccccgattcctccagcct
tcatctgaagcggacgggctggagatcatcgcggcgacgggacctgcatcggaatgggaa
ggggttgcacaccggattaaggcattgctcaggtccggtcgtgaggaatcgggaactgtc
atcgatcacggggccaatcccggttctgtccagccgcaggacatcgtgatcggcctgcgc
accattaccgacgacggccctcgactgagggacttccttcggtcggcagggcttcccgtc
tggtgtgagaccgaagtcccgttcacggcaagcccgatggtccgcgccgtctcctcgttg
cttcagttagaactggaagactggccttacgaacgcctgttgtcggttttggattcgagt
ttctttcagccgaactggcctgagctggcctcgaaccggggtgtccgcgttgtcgctgct
gtactgcgtcaactgcagcttggtggaggacgcgagaccatcctgcgcgtggtgggacga
gcagccggcgaacccgcgtccgacccggttgccgaagagcgcagtgccactgcagcggct
cgcgtggctcttcccctgctgacgcgactgtcacgaagtctcgaccagttacggcgctcg
cacacacttgccgattgggcggacgtcttggcgtccatcggtgaagacctcggttggacg
cgtcgtcacctcaatgcagatgacgcgcttgcggtgagcgaatcgcgcgactgggacttg
ctccagcggatcctgcgaacggccgccgaagccgatcagaagttgtcagagggaggacgc
gctcggtcgatgaaacttcctgagttctgcgcggaaatgagtgacttgctcagccatgag
acgttgaaggcggaaatcgagccgggggggagtatccggatcctgggaatggaacagatc
cgaaatctcgatatcccgcacctgttcctcctgggaatgacggagaacagcttccccatg
agtcgcagcgacgactgtcttttcagcgaagcagaacgtcgcgaattcaacgaacatggc
gtgatcctgcggcaccggtcgagtcatcaggcggacgagatgttcctgttctacagcgtt
gtgacgcgagcgcgaaaaagcctgacgctgagttacccggcagtcaatctgaagggacaa
ccggtcttttcgagtccctatgtgacggcgctcacgacgttgttcacgaaaggggcgttt
gtcgaaacgtatgaaggacagctgaatcctgtacccaccgtcgatcgagcattgactccg
accgatgtccgactggcggcgatggtgcaggcccacacagggcatcccgagctgttccgc
gccgtgctggagtgggaacctttgcggaagaccgcatttaacagtctcgcggcctgcgat
gtggcccatcaccgattccatcagcacggattcactccgtacgaggggcgactggagctt
ccccaaaaccaggcgctgctgcagcaccgattcgggtcgcgacatcaattcagtgcaacg
gaactcgaagcctacgcgaaatgccctttccagttctggctctcgaccgtgctgcgaatc
gcgccggtcgattcaccagaggaagggaccgattttgcggcacggggtaccttgctccac
gatgtcctggcggaattgctgaaagaaggattcgccgaagatcgcgatgccttgcgcagc
cgattccacgagctggtcagcacacaactcgatcgacgtattcccgatacggaattgcaa
cgggctttgattgaggtcgaacggctgattctgttgcggtggggagacgcgttcgcggaa
cagcacaccagctatgcggaacagattggcaacgtgtttcgccggattgaatcgctgcct
ccggaaattccgttcggccggttgcccgatgcccctgtctcagacgatcagtcgaaccct
gaaatccggttcggcaatgaagagactggcgtcaaggtacggggccggattgaccgagtc
gattgcggaacaatcgaagggcagaacgcatttttggtgatcgactacaagaccggacaa
cgccccagtctgaaacgagaagatatgatctcggggcgctcgatccagcttgcactttat
ctgatcgcggtcagacgtctggggctggttgcaccggacgcggtcccattccagatggga
tactgggcactcaaggaaacgggctataaaccgggcctcacgaagaaactcaagaatttc
gcaccgctggaagaggctgtcgtgaagtcgctggatgtcctgctggacgatctcttacct
cggctggcagagggaatccgctcaggaaacttcatcgttgaaaacaatgacgataactgc
accgggcactgccagtaccggactgtctgccgcgtgaaccagcttcgtccactcgctgaa
gcgctggggaagcgatcgcccgcgccggtcgatccatgtcccatcgctgacgaatag
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