Schlesneria sphaerica: ACGY09_16230
Help
Entry
ACGY09_16230 CDS
T11240
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sspe Schlesneria sphaerica
Pathway
sspe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sspe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACGY09_16230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspe03021
]
ACGY09_16230
Transcription machinery [BR:
sspe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACGY09_16230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
Terminase_5
HTH_AsnC-type
HTH_28
HTH_3
IbrB_C
Motif
Other DBs
NCBI-ProteinID:
XJS14146
LinkDB
All DBs
Position
4478231..4478866
Genome browser
AA seq
211 aa
AA seq
DB search
MSDDEASLVQEVRQGTAAAWEQLIARYEGRLLAFVRSRLQDDTAAEDVVQEAFLGFLVSL
PNYNESTPLEAFLFSITAHKLTDVLRRNGRRPLLPLIHSSESQAGNEPADRGRKVSSMAR
SQERSVAQRRVLSDCLKGLIHSWLSRGEFERLECVELLFVLGWSNKRVAEKLGISEQAVA
NHKDFTVRKLKEAAAAARLRDVDWNQLKLDS
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgatgaggccagtctggtgcaggaggtgcggcaggggactgctgcggcctgg
gaacagttgattgcccgctatgagggacgactgctggcattcgttcgcagtcgcttgcag
gacgacacggcggccgaggatgtggtgcaggaagcgtttctcggctttctggtctcgttg
cccaactacaatgagtccacgccgctggaagcgtttctgttttcgattacggctcataaa
ttgaccgatgtcttgcggcgaaacgggcgtcggccactgctgcctctcattcacagcagc
gagtcgcaagcggggaatgaaccggccgatcgagggcgaaaagtgtcgagcatggcccgg
tctcaggaacggtcggtcgctcagcggcgggtcctttccgactgtctgaaaggactgatc
cattcctggttaagccggggggagtttgaaagactggagtgcgtcgagctcctgttcgtc
ctcggatggtccaacaagagggtcgccgagaagttgggaatcagcgaacaggccgtcgcg
aaccacaaggatttcactgtccggaagctgaaggaggccgccgcggcggctcggctgaga
gatgtcgactggaatcaactgaaactggattcttaa
DBGET
integrated database retrieval system
