Schlesneria sphaerica: ACGY09_17070
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Entry
ACGY09_17070 CDS
T11240
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sspe Schlesneria sphaerica
Pathway
sspe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACGY09_17070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspe03019
]
ACGY09_17070
03400 DNA repair and recombination proteins [BR:
sspe03400
]
ACGY09_17070
Enzymes [BR:
sspe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACGY09_17070
Messenger RNA biogenesis [BR:
sspe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACGY09_17070
DNA repair and recombination proteins [BR:
sspe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACGY09_17070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XJS14310
LinkDB
All DBs
Position
complement(4689427..4690872)
Genome browser
AA seq
481 aa
AA seq
DB search
MKPLDVLQQYFGYDSFRPLQEMVIHHVLSHQHALVMMPTGGGKSLCYQIPALIPPSPETS
GPTRTPLTLVLSPLIALMKDQVDSLRNRGISATYINSSLNRQERERRYKGVAKGDYQLLY
VTPERFRKEEFLQALQQRRVHLLAVDEAHCISEWGHDFRPDYTRLAEFRERLGNPTTIAL
TATATPEVQQDIVRQLGLSPDEIKTFDAGIERPNLTLAVNEVWGEDEKIDRILHIRQQHS
HTPGSGIIYFTLIRSLERFSERLQSLKVPHVCYHGDLERNYRRKIQNEFMEGRCPLVLAT
PAFGMGIDKNDIRFVIHAEVPGSMEAWYQEIGRAGRDGLPADCVLLYEESDLLTQMEFLR
WSNPDAEFYQRVYDLLVHNEEQISAFGLEWMREKLHARQKHDHRLETVLGMLERYGVIEG
TWDPMQITVLGPLAPELRDEQRLADKLRRDQQKLLALVQFIRSEGDRKSYLNDYFGITPH
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctctcgacgtcttgcagcagtatttcggttatgactcgttccgccccttgcag
gaaatggtgattcaccacgtcctgagccaccagcatgccctggtgatgatgccgaccggg
ggtggcaaatcattgtgctatcagattcccgcgctgattccgccttcccccgaaacgagt
ggtccgacacggacacccctgacactcgtcctgtcaccgctgattgcgttgatgaaggac
caggtcgattcactgcggaaccgtggaatctccgccacctatatcaactcgtcgctcaat
cggcaggaacgcgaacggcgctacaagggggtcgcaaaaggagattaccaactgctgtac
gtcacgcccgagcgatttcgaaaagaggagttcctgcaggcgctccagcaacgccgggtc
catttgctggccgtggatgaagcccattgcatcagtgaatggggacacgatttccgtccc
gactacacccggttggccgagttccgcgagcgactcgggaatccgacgacgatcgccctg
acggcaaccgcaactccggaagtgcagcaggatatcgtccggcaactcggcctttcgccc
gacgaaatcaaaaccttcgacgccggaattgagcgtcctaacctgaccctcgcggtgaac
gaggtttggggcgaagacgaaaaaatcgaccggatcctgcacattcggcagcaacattct
catacccccggcagcgggatcatctatttcaccctgatccggtcactggaacgcttcagt
gaacgcctgcaatcgctcaaggtcccgcacgtctgctaccacggcgatctggaacggaac
taccgtcgcaagattcagaacgagttcatggaggggcgttgtcccctggttctcgccaca
cccgccttcggcatggggatcgacaaaaacgatattcggtttgtcattcacgccgaggtt
cccggctcgatggaggcctggtatcaggaaattggacgggctggacgtgacggtctgccg
gcagactgcgtcctgctttacgaagaatccgatctgctgacacagatggagtttcttcga
tggagcaatccggacgccgagttctatcagcgagtgtacgatctgctggtccacaacgaa
gaacaaatctcggcgtttggtctggaatggatgcgggaaaagctgcatgcccgacagaaa
catgaccaccggctggaaacagtcctcggcatgctcgaacggtacggcgtcattgaaggg
acctgggatccgatgcagatcaccgttctcggtccgctggctccggagttacgcgacgaa
cagcggctggccgacaaactccgtcgcgaccagcagaagctgctcgcgctggtccagttc
atccgcagcgagggggaccggaagtcgtacctcaacgactacttcggaatcacccctcac
gactga
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