Schlesneria sphaerica: ACGY09_24860
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Entry
ACGY09_24860 CDS
T11240
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sspe Schlesneria sphaerica
Brite
KEGG Orthology (KO) [BR:
sspe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspe03032
]
ACGY09_24860 (topA)
03400 DNA repair and recombination proteins [BR:
sspe03400
]
ACGY09_24860 (topA)
Enzymes [BR:
sspe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACGY09_24860 (topA)
DNA replication proteins [BR:
sspe03032
]
Prokaryotic type
DNA Topoisomerases
ACGY09_24860 (topA)
DNA repair and recombination proteins [BR:
sspe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACGY09_24860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Dynamin_M
DPM3
Motif
Other DBs
NCBI-ProteinID:
XJS15810
LinkDB
All DBs
Position
6946722..6949358
Genome browser
AA seq
878 aa
AA seq
DB search
MKRLVIVESPAKAKKIGSYLGNDYTVMASMGHVRDLPESAKDIPEEIKKTKSNLAKYGVD
VDNEFEPLYIVSDRRKKLVKELKDALKGAGELLLATDEDREGESIGWHLAEVLAPKVPVK
RMVFSEITKEAIQEAVKKTRDLDMNLVAAQEARRIIDRLYGYRLSPLLWKKVRPKLSAGR
VQSVAVRVLVKRELERLAFKSGSYWDLKSTLKTETGAEFEATLATVGGERVATGKDFDEQ
TGKLKVDAKVKLLDEAAARELQARLQDQPWVVSSVETRLQTRKPYAPFTTSTLQQESNRK
LGLTARDTMRIAQSLYEDGYITYMRTDSVNLSQEALNAARKSVQDRYGKEYLSPEPRQYT
TKTKNAQEAHEAIRPAGTEMKTAEEHGLSGREAALYALIWKRTVATQMAEAQLRFQTVTV
AVEDAEFKATGRHVEFPGFFRAYVEGVDDPEAALDDQEASLPPLAEKDRLNCALLDPIGH
ETKPPARYTEATLVKALEADGIGRPSTYATIIDTIINRDYVVKQGTQLVPTFTAFAVTQL
LETYFPKLVDFGFTAKMEQDLDDIANGQGDRLPYLQHFYSGSDGLDAQVKANEEAIDPRL
ACTLTFNGLSSRIRVGKFGPYVETERNGETVTASIPDSLAPADINNEIAENLIDLKQRGP
QSLGEHPETGLPIFLLVGPFGPYLQLGEVGEDGTKPKRVSLPKTRDPNSITLKDALDYLS
LPRQLGKHPVTGHVVNAGIGMYGPYVKHEKTFKSLDKTDDVLSITMERALELLAQAKTKA
APVPLKELGPHPDDKEPVQIFDGRYGAYVKHGKVNATLPKGTDPQGFTLQEALPLLAERA
ARGPATKKSRGRSTTEGAAKATKKAVKKAAKKKKKADN
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattggtgatcgtcgaatcacccgcaaaagccaaaaaaatcggcagctatctc
ggtaatgactatacggtcatggccagtatggggcatgtgcgcgacctccccgagagtgct
aaagatatccccgaagagattaagaagacgaagtcgaatctcgccaaatacggtgttgac
gtcgacaacgagtttgaaccgctctacatcgttagcgatcgacgcaagaaactggtgaag
gaactgaaggacgcgctgaaaggcgccggcgaactgttactcgcaaccgacgaagaccgc
gaaggagagagcattggctggcatctcgcggaagttcttgcgccgaaagtccccgtgaag
cgcatggtcttctcggaaatcaccaaggaagccattcaggaagccgtcaagaagacgcgc
gatctcgacatgaatctcgtcgctgcccaggaggcgcgccgaatcatcgatcgcctctac
ggttaccgcctcagcccactcttgtggaagaaggtcaggcccaagctgtcggcggggcgt
gtacagtcagtggcggtgcgcgtgctcgtgaaacgggaactcgagcgactggccttcaag
tcgggttcatactgggacttgaagtcaacactaaaaacggaaaccggggcagaattcgag
gcaacgctggcgacggttggcggcgaacgagtcgccacgggcaaagactttgacgagcag
acgggcaagctcaaggttgatgccaaggtcaagctgcttgacgaagcagcagcgcgggaa
cttcaagcccgtttgcaggaccagccctgggtggtgtcgtcggttgaaacacgactgcaa
acccgtaagccgtatgctcctttcacgaccagcacgttacagcaggagtctaaccgcaag
ctcggattgactgcccgtgacacgatgcggatcgcacaaagcctgtacgaagacggctat
atcacttacatgcgaaccgacagtgtcaatctttctcaagaggcactcaatgccgcgaga
aaatcggtgcaggatcgctacggaaaagaatacctcagccctgaaccgcgtcagtacacg
acgaaaaccaagaacgcgcaggaagctcacgaagccattcggcccgccggaacggaaatg
aaaacggccgaagagcacggtctgtctgggcgtgaagcggcgctctacgcgctcatctgg
aaacggaccgtcgcgacgcaaatggcagaagcacagctgcgattccagacggtgacggtt
gctgttgaagatgccgaattcaaagcaacgggccgccacgtcgaatttcccggcttcttc
cgtgcctacgttgaaggggtcgatgatccggaagccgcactcgacgatcaggaggcatcc
ttgccgccactggccgagaaagatcgactgaactgtgctctgctcgatcccatcggtcat
gaaaccaagccacccgcacgctacacggaagccacgctggtgaaggcactggaagcagat
ggaatcggccgaccgagtacctatgcgacgattattgacacgattattaatcgtgactac
gtcgtcaaacagggaacgcagcttgtaccgacgttcacagctttcgcagtaacacaattg
ctggaaacctatttccccaagctggtcgacttcgggttcactgccaagatggagcaggac
ctcgacgatatcgctaacggccagggggaccgacttccctacctccagcatttctacagc
ggatcggacggactcgatgcccaggtcaaggcaaatgaagaggcaatcgatccgcgtctt
gcctgcaccttgacattcaatggtttgtcgtcgcgaattcgagttggaaaattcggcccc
tacgtggaaaccgaacgcaacggagagaccgttactgcgtcgattcctgacagtctggca
ccggcggacatcaacaatgagattgcagagaatctgattgatcttaagcagcggggcccc
cagtcgctgggtgagcatcctgagacgggactgccgatcttcctgctggtcgggcctttc
ggaccctatctgcagctcggtgaggtgggggaagacggaaccaagcccaagcgggtctcc
cttcccaagacacgcgatccgaattcaatcacactgaaagacgcgcttgattatctgtcg
cttccgcgacagcttggaaagcacccggtgacggggcatgtggtcaacgccgggatcggt
atgtatggcccctatgtgaaacatgagaagaccttcaagtcactggacaagaccgatgac
gtgctgtccatcaccatggagcgggcgctcgaactgcttgctcaggcgaagacgaaggcg
gcaccggtcccgctgaaggaacttggaccgcatccggatgacaaagagcctgtgcagatt
ttcgatgggcgctatggtgcctacgtgaagcacgggaaagtcaacgcgacgctgcccaag
gggacagatccccaggggttcacgctgcaagaggcgctgccgctgcttgcagagcgggcc
gcacgcggtcctgccacgaaaaagtcgcggggtcgatccacgacggagggtgccgcaaaa
gctaccaaaaaagccgtgaagaaggccgcgaaaaagaagaaaaaagcggataactga
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