Sporomusa sphaeroides: SPSPH_000980
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Entry
SPSPH_000980 CDS
T10405
Symbol
spoVD_1
Name
(GenBank) Stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ssph Sporomusa sphaeroides
Pathway
ssph00550
Peptidoglycan biosynthesis
ssph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPSPH_000980 (spoVD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssph01011
]
SPSPH_000980 (spoVD_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssph01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SPSPH_000980 (spoVD_1)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WXA37434
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Position
124401..126377
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AA seq
658 aa
AA seq
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MKVMPGAIQKRLAWFLMLTILALTGLTARIAWIQLGEGERLSARVQDQLRENRIIQSPRG
TIYDRTGRELAVSSMSKSLYANPREIKDADMLAELLAPIIGMKADNIKNRLIAGASFVWL
RRTLEPEQAAAVIALIKEHQLTGLGFIEESKRYYPNDGLAAQVLGFVGTDDVGLEGLEMA
LDKRIKGRELKQAIDTDSYGTPIFSSIFSFIPKKQGQSVYLTIDSTIQYIVERALDKAME
QTEAKAATVIIMNPKTGEILAMANRPNYNPNQFGQYSPEEWKNRAVSVVYEPGSTFKAVI
AAAALEEGKVRPDEKFIDKGYVEISGRRIKNWSGDSYGEITFMDIIKDSINTGFVEVGMR
VGAAKLTNYVRAFGFGNTTGIELPGEEAGILFDPKEMRDSDIATMSIGQSIAVTPLQLTA
AIAAIANDGVLLQPRIIKEYRHEDGTLAESFDPVVVRQAVSSETARTLTMMLEKVVSEGG
AKRAAVQGYRFAGKTGTAEKLKPGGQGYLEGRYIASFAGFGPVEDPQVAALIVLDDPAGI
YYGGQIAAPVFNDIMTQVMRYLNVRPNDTNQVLPPVKPAAVQPYAAPVPDPGPPPVVPPG
QVLMPVLAGKTIREAADLLHSLELTFVPVGTGVAIKQSVTANTPVKPGTEIIVYFEPR
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatgccgggagctattcagaaaagactggcctggttcttgatgctgacaata
ctggcgcttaccggtttgacagcccggattgcctggattcagttgggggaaggggagcgg
cttagtgccagggtgcaggaccagctgagagaaaacagaattatccagtcaccgcgtggt
actatttatgaccgtaccgggcgggaattggctgtaagcagtatgagcaagtcgctgtat
gccaatccgcgggagataaaagacgcggatatgctggccgagctgctggcgcccattatt
ggcatgaaggcagataatattaagaatcgtctcatagccggtgccagctttgtctggctt
agacgcacacttgagccggaacaggctgctgccgtcattgcgcttatcaaggaacatcag
cttaccggtcttgggtttattgaggaaagtaaacgttattatcccaacgatggcttagcg
gcacaggttttggggtttgtcggcaccgatgatgtgggacttgaaggcctggagatggcg
ctggataagagaattaaagggcgggagcttaagcaggctattgatactgacagttatggg
acgcccatcttttcttcaatattttcatttattcccaagaaacagggccaatcggtctat
ctgactattgacagcaccattcagtatatagtggaacgggctttggacaaggctatggaa
cagacggaagcaaaagcagcgaccgtcatcattatgaacccgaaaaccggagaaattctg
gctatggccaaccggcccaactataatccgaatcaatttggacaatatagcccggaagaa
tggaaaaaccgggcagtgtctgttgtgtatgagcctggttcaacctttaaagccgttatt
gcagccgcggcgctggaagaaggcaaggtgcgccctgatgaaaaatttattgataaaggc
tatgtagaaatatcggggcggcggatcaaaaactggagcggcgacagttacggtgaaatt
acatttatggatattattaaagactcgatcaataccggttttgtcgaagtcggtatgcgg
gttggggcggctaaattgacaaactatgtgcgggcgtttggctttggcaacactaccggc
attgaattacccggtgaagaggcaggcatcttgtttgacccgaaggagatgcgtgacagc
gatatcgccaccatgtctattggacagagtattgctgttaccccgctgcagcttactgcc
gccatcgccgccattgctaatgacggggtactgctgcaaccccggattataaaagaatac
cgtcatgaagacggcaccctggcagagtcctttgaccccgttgtggtcagacaggctgtc
agttcggaaaccgcccgtaccctgacgatgatgttagagaaagtggtgagcgagggcggc
gctaagcgggctgcggtgcaggggtatcgttttgccggaaaaaccggtacggcggaaaaa
ttaaaaccaggcgggcaaggctatctggaaggacgttatattgcctctttcgccgggttt
ggaccggtggaggaccctcaggtggcagcgctgattgtgcttgatgatccggcaggcatt
tattatggcggacaaattgcagcgccggtatttaatgatattatgacccaggttatgcgt
tatttgaatgtacgtcccaatgataccaatcaggtgctgccgccggtaaaaccggctgcc
gttcagccttatgccgcgccggttcctgatcccggaccaccgccggtagtgccgccgggg
caggtgctgatgcctgtgcttgccggcaaaactatccgtgaggccgctgacctgctgcac
agtctggagcttacttttgtgcctgtcggtaccggcgtggcaataaaacaaagtgtgact
gccaatacacctgttaagccaggaactgagattatcgtctattttgaaccccgatag
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