Sporomusa sphaeroides: SPSPH_003300
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Entry
SPSPH_003300 CDS
T10405
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ssph Sporomusa sphaeroides
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssph03032
]
SPSPH_003300 (hup)
03036 Chromosome and associated proteins [BR:
ssph03036
]
SPSPH_003300 (hup)
03400 DNA repair and recombination proteins [BR:
ssph03400
]
SPSPH_003300 (hup)
DNA replication proteins [BR:
ssph03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SPSPH_003300 (hup)
Chromosome and associated proteins [BR:
ssph03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SPSPH_003300 (hup)
DNA repair and recombination proteins [BR:
ssph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SPSPH_003300 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
DUF2267
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Peptidase_C80
Motif
Other DBs
NCBI-ProteinID:
WXA37666
LinkDB
All DBs
Position
386348..386623
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AA seq
91 aa
AA seq
DB search
MNKTDLVKAVAQKADMTQKDAEKAINAVFAAVEEALANDDKVQIIGFGTFEVKTREERKG
RNPQTGKEITIPASKNPVFKAGKGLKDAVNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaccgaccttgtcaaagcagtggctcaaaaggctgatatgactcagaaagac
gcagagaaagctatcaatgctgtatttgccgctgtagaagaagctttagccaacgatgat
aaagtacaaatcattggatttggtactttcgaagtgaaaacccgtgaggagcgtaaagga
cgtaatcctcagaccggcaaggaaattactattcccgcttccaaaaatcctgtgttcaaa
gcaggtaaaggtctgaaggatgctgtaaacgcgtaa
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