Sporomusa sphaeroides: SPSPH_003940
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Entry
SPSPH_003940 CDS
T10405
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPSPH_003940 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssph01007
]
SPSPH_003940 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssph03016
]
SPSPH_003940 (lysS)
Enzymes [BR:
ssph01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SPSPH_003940 (lysS)
Amino acid related enzymes [BR:
ssph01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SPSPH_003940 (lysS)
Transfer RNA biogenesis [BR:
ssph03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SPSPH_003940 (lysS)
Prokaryotic type
Other AARSs
SPSPH_003940 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WXA37730
LinkDB
All DBs
Position
448223..449722
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AA seq
499 aa
AA seq
DB search
MAETEAVQDNQQTAEDLNELMKVRREKMDKIAAQGIEPFGRKYDFTHHAQTVIEQYAQLE
GQTVRIAGRLMAVRGHGKASFGHVMDMTGKIQVYFRQDVLGETAYEQFRLLDIGDLVGIE
GVVFTTQKGEISIKATSFEFLAKTLRPLPEKWHGLKDVETRYRQRYLDLIVNPEVRNNFV
IRSKIIRAMRQQLDDRGFLEVETPMMHPIAGGAAAKPFVTHHNALDMKLYMRIAPELYLK
RLIVGGFEKVYELGRVFRNEGISIKHNPEFTMIELYQAFADYQDVMRLTEEVVAGVAQAV
LGTTKITYQGQEIDLTPPWNRMTMPEAIKKFAGVDFDEVTTIEAARAIADKLGVKYEQKH
GIGGILNNVFEEVAEQHLIQPTFIIGHPTEISPLAKRNKDNPDITDRFEAFVFAREIANG
FSELNDPIDQHGRFADQLTQRLAGDDEAHMMDEDYITALEYGLPPTGGLGIGIDRLVMFL
TDSYSIRDVLLFPHMRHRD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacagaagcagtacaagataatcagcagacagcagaagacctaaacgaattg
atgaaggttcgccgggagaagatggataaaattgctgcccaggggattgagccttttggg
cggaaatatgattttacccatcacgcgcagaccgtcattgagcagtatgctcaattagag
ggacaaactgtccgcatagccggccggcttatggccgtacgcggtcatgggaaggccagc
tttggccatgtaatggatatgaccggcaaaattcaggtttattttcgccaggatgtgctg
ggggaaactgcctatgagcagtttcgactcttagatattggtgatcttgtaggcattgaa
ggcgtggtatttacaacccaaaaaggtgaaatcagcatcaaggccaccagctttgaattt
ttggctaagacactccggccgctgccggaaaaatggcatggattgaaagatgttgagacc
cgctatcgtcagcgttaccttgatttgattgtaaaccctgaggtacgcaataacttcgtc
atacgcagcaaaatcatcagagctatgcgccagcaattggatgatcgcggtttcctggaa
gtggagacccccatgatgcatccgatcgccggtggggcagcagccaagccgtttgttacc
catcataatgcacttgacatgaagctatatatgaggattgcgccggagctatacctcaaa
cgcctgattgtgggcggttttgaaaaagtgtatgaactcgggcgggtattcagaaacgaa
ggcatttcgattaagcataatccggaattcaccatgatcgaactgtatcaggcgtttgct
gactatcaggatgttatgcgtttgacagaagaagtcgtagccggtgtcgcccaggccgtt
cttggcaccaccaagattacttatcaaggacaggaaattgacctgacaccgccctggaac
cggatgactatgccggaagctattaaaaagtttgccggagtggactttgatgaggttacc
accatcgaagcggctagggctattgccgataaactaggtgttaagtatgaacaaaagcat
ggaattggcggaattttgaacaatgtatttgaggaagtggcagagcagcatttgattcag
ccaacctttattattggccaccctaccgagatatcacctttggctaaacgtaacaaagac
aatccggacattaccgaccggtttgaggcatttgtttttgcccgtgagattgccaatggt
ttttcggaattgaatgatccgattgatcagcacggacgatttgctgatcagctgacacag
cggctggctggtgatgatgaagctcatatgatggatgaagactatatcaccgcacttgag
tatggcctgccgcctacaggtggtctgggtattggtattgaccggttggttatgtttttg
accgattcctattccatccgggatgtgctgcttttcccgcatatgcgtcaccgtgattaa
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