Sporomusa sphaeroides: SPSPH_004100
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Entry
SPSPH_004100 CDS
T10405
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ssph Sporomusa sphaeroides
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssph03110
]
SPSPH_004100 (clpC)
Chaperones and folding catalysts [BR:
ssph03110
]
Heat shock proteins
HSP100
SPSPH_004100 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Sigma54_activat
AAA_16
AAA_22
AAA_18
nSTAND3
TniB
Mg_chelatase
IstB_IS21
UVR
AAA_14
AAA_28
AAA_7
RuvB_N
bpMoxR
Torsin
RNA_helicase
TsaE
AAA_25
AAA_24
Zeta_toxin
NACHT
Cytidylate_kin
AAA_23
DNA_pol3_delta2
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
WXA37740
LinkDB
All DBs
Position
461354..463804
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AA seq
816 aa
AA seq
DB search
MFNRFTDRARKVLILAQQEAARYGHGYIGTEHLLLGLLREGEGVAAKALASLGLEVDSVR
EQVETILGTGQEQANDIGYTPRAKKVIELAMEEALRLGHNYVGTEHILLGLIREGEGIAA
QVLTGMGVDINLMRQRVIEMLGGFAMSGQTPQPKVQGAKPAASSNTPLLDEFGRDLNKMS
QEGKIDPVIGRDAEIERVIQITLRRTKNNPVLIGEPGVGKTAIAEGLARRIVEGQVPEIL
RNKRVVSLNMASMVAGTKYRGEFEERLKKVIDEIREAGNIVLFIDELHTLIGAGAAEGAI
DAANILKPALARGELQVIGATTLNEYKKYIEKDAALERRFQPITVGEPAVEDAIAILKGI
RDKYEAFHRAQITDEAIDAAVNLSHRYISDRFLPDKAIDLMDEAASRVRLQAFSIPPDVK
EIEKRLEQVRTEKEGAIAAQEFERAASLRDMEQQIREELGGKQKQAKQRGNERIVVTAED
IAHVVSTWTRIPVKKLAEEESERLLKLEEILHNRLVGQHEAVQAVARAVRRARAGLKDPK
RPIGSFLFLGPTGVGKTELSRALAEALFGDETAMIRLDMSEYMEKHTVSRLVGAPPGYVG
YEEGGQLTDAVRRKPYSVILLDEIEKAHYDVFNMLLQVLEDGRLTDSQGRTVDFKNTVII
MTSNVGSQHLKKDAAALGFLSGERAKANEGEAAKSRVLDEVKRVFRPEFLNRIDEIIVFS
SLTDDDLKQIVEIMLQEVTKRLVHANLKLELSDSAKQELVKEGRDHAFGARPLRRAIQKM
IEDEVSEMIIRQSITGGDTVLVDAAENGKLKFAKKA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaacagatttaccgacagagcccgcaaagtattaatactggcacagcaggaagcg
gccagatacggacatggatatatcggcaccgagcatttgctgctgggacttttgcgtgaa
ggcgagggtgtagccgctaaggcgctggcttcgctgggattagaggtggattccgtacgg
gaacaggtagaaaccattctgggtaccggccaggagcaagccaacgatatcggttatacg
ccgcgggccaagaaagtcattgaactggcaatggaggaagccttgcggctgggtcataat
tatgtgggaacagaacatattctgctggggctaatccgggagggagaaggtattgccgct
caggtactgacaggtatgggagtggatattaaccttatgcgtcagcgggtcattgaaatg
ctgggcggttttgcgatgtcagggcagacgccccagcccaaagtgcagggagctaaaccg
gcagcatccagtaataccccgctattggatgaattcggccgtgatctgaataaaatgtcg
caggaaggcaagattgatcctgttatcggccgtgatgccgagattgagcgggttattcag
attaccctcagacgcactaaaaacaatccggtgctgattggcgaaccgggggttggcaag
accgccattgccgaaggcttggccagacgcattgttgaaggtcaggtgcccgagattctg
cgtaataaacgcgttgtttcgctcaatatggcatccatggtggctggtaccaagtaccgg
ggtgagtttgaagaacgtctgaaaaaggtaattgacgaaattcgtgaagccggcaatatc
gtattgttcattgatgagctgcacaccctgatcggcgccggtgctgccgagggagccatt
gatgcggccaatatcctgaagccggcattagcccggggcgaattgcaggttattggcgca
accactctcaatgagtacaaaaaatatatagaaaaagatgcggcgctggaacggcgcttc
caacccatcacggttggcgaaccggctgtggaagatgccattgccattttaaaaggaatc
agggacaaatatgaggcctttcaccgggcgcaaattaccgatgaggccattgacgcggcg
gtaaatctgtctcaccggtacatttctgacaggtttttgcctgacaaagccattgactta
atggatgaggccgcctcacgggtacgtttgcaggcattttccattccgcctgatgtcaaa
gaaatagaaaaacgcttggaacaggtccggacggaaaaggagggagccatcgccgcgcag
gaatttgagcgggcagccagccttcgcgatatggagcagcagatccgtgaagagcttggc
ggcaagcaaaagcaggcaaaacagcgcggtaatgaacgtattgttgttaccgctgaggat
attgctcatgtggtgtctacctggacgcgcattccggttaagaaattagccgaagaagaa
tccgaacggctgctgaagctggaggaaattctccataaccggctggtcggccagcatgag
gccgtgcaggcggtagcccgtgccgtacgccgcgccagagccggacttaaagatcctaaa
cggcctattggctccttcctgttcctggggccgacaggggtgggcaaaaccgagctgtca
cgcgctttggccgaggccttattcggcgatgaaaccgcgatgattcgtcttgatatgtct
gagtatatggaaaaacacacggtgtcccggcttgttggcgctcctcccggctatgtcggc
tacgaggagggcggtcaactgactgacgccgtacgccgcaaaccctattcggttattctt
ttggatgagatcgaaaaagcccattatgatgttttcaatatgttgctgcaagtactggaa
gacggccgtttaaccgatagtcagggccggacggttgatttcaagaatactgtcattatc
atgacatctaatgttggttcacagcatttgaaaaaagatgcggccgcgcttggcttttta
tcaggcgaacgcgctaaagccaatgagggggaagcagctaaaagccgggtattggatgag
gttaagagggtatttagaccggaatttttaaaccggattgatgagatcatagtctttagc
agtctgactgacgatgaccttaagcaaattgtagagatcatgcttcaggaagtaaccaaa
cgcctggttcatgctaatctcaagcttgagctgagcgattcagccaagcaggaattagta
aaagaaggccgtgatcacgcttttggtgcccgtccgctgcgtcgtgccattcaaaaaatg
atcgaagacgaagtatctgagatgattatcaggcaatccataaccggcggtgataccgta
ctggtggatgctgctgagaatggtaaattaaagtttgccaaaaaagcctaa
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