Sporomusa sphaeroides: SPSPH_012170
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Entry
SPSPH_012170 CDS
T10405
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPSPH_012170 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssph03019
]
SPSPH_012170 (groL_1)
03110 Chaperones and folding catalysts [BR:
ssph03110
]
SPSPH_012170 (groL_1)
03029 Mitochondrial biogenesis [BR:
ssph03029
]
SPSPH_012170 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssph04147
]
SPSPH_012170 (groL_1)
Enzymes [BR:
ssph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SPSPH_012170 (groL_1)
Messenger RNA biogenesis [BR:
ssph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SPSPH_012170 (groL_1)
Chaperones and folding catalysts [BR:
ssph03110
]
Heat shock proteins
HSP60 / Chaperonin
SPSPH_012170 (groL_1)
Mitochondrial biogenesis [BR:
ssph03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SPSPH_012170 (groL_1)
Exosome [BR:
ssph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPSPH_012170 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
SPSPH_012170 (groL_1)
Exosomal proteins of breast cancer cells
SPSPH_012170 (groL_1)
Exosomal proteins of colorectal cancer cells
SPSPH_012170 (groL_1)
Exosomal proteins of bladder cancer cells
SPSPH_012170 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WXA38526
LinkDB
All DBs
Position
1377820..1379466
Genome browser
AA seq
548 aa
AA seq
DB search
MAKQILFDEEARRALERGVNALANAVKVTLGPKGRNVVLDKKFGAPAITNDGVTIARDID
LEDPFENMGAQLVKEVATKTNDVAGDGTTTATLLAQAMIREGMKNVAAGANPMILKKGIQ
QAVNVLVGEIKNSSKKIETKDAIAQVASISAGDEEIGSLIAEAMEKVGKDGVITVEESKT
MGTDLDVVEGMQFDRGYISPYMITDPDKMEAVLNDPYILITDRKIGAIADLLPVLEKVVQ
QGKELLIIAEDVEGEALATLVVNKLRGTFRAVAVKSPGFGDRRKAMLEDIAIVTGGAVIT
EELGRKLDSVTMEDLGRARQVRVSKEETTIVDGSGQAEEIKKRVNQIRAQIEETTSDFDK
EKLQERLAKLAGGVAVIQVGAATEVELKEKKLRIEDALNATRAAVEEGIVAGGGTTFISI
QASLENLKLVGDEKTGVEIVKRAIEEPVRQIANNAGLEGSVVVANVKKAGKGVGFNALTE
EYVDMIAAGIVDPAKVTRSALQNAASIAAMVLTTETLIADKPEKDGGAAAAMGGMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaaattttatttgacgaagaagctcgtcgggcgcttgagagaggcgtaaac
gctctggctaatgctgttaaagttactttggggcctaaaggccgcaatgtagtgcttgat
aagaaattcggtgctccggcaatcactaatgacggtgtaaccatcgcccgtgatattgat
ctggaagatccgtttgaaaatatgggtgcgcagcttgttaaagaagttgctaccaaaacc
aatgatgttgccggtgacggtactaccacagccactttgcttgcccaagcaatgattcgt
gaaggcatgaagaacgtagctgccggtgcaaaccccatgattctgaaaaaaggtattcag
caagcggtaaacgtacttgttggcgaaatcaaaaattcctctaagaaaatcgaaaccaaa
gatgctatcgctcaagtcgcttccatctcggctggtgacgaagagattggttcattgatt
gcggaagccatggaaaaagtcggcaaagatggtgttatcaccgttgaagagtccaaaacc
atgggtactgaccttgatgtggttgaaggcatgcaatttgaccgcggttacatttccccg
tacatgattaccgacccggacaaaatggaagccgttcttaacgatccttacattctgatt
accgaccgtaaaatcggcgctattgccgacctgctgccggtactggagaaagtagttcag
caaggcaaagaactcttaatcattgctgaagatgtggaaggcgaagctttggctaccctg
gtggttaacaaactccgcggcaccttccgtgctgtagctgttaaatcgcctggttttggt
gatcgcagaaaggctatgctggaagatatcgccattgttaccggtggtgctgttattacc
gaagaacttggccgcaaacttgacagcgtaactatggaagaccttggccgtgcccgtcag
gttcgcgtatccaaagaggaaactaccattgttgacggtagtggccaggctgaagaaatt
aaaaagcgtgttaaccaaatccgcgctcagatcgaagaaactacttctgattttgataaa
gaaaagctccaggaacgtctggccaaattggctggcggcgtagccgttatccaagtgggt
gctgctactgaagttgagcttaaagagaaaaaactgcgtatcgaggatgccctgaatgct
actcgcgccgctgttgaggaaggcattgttgccggcggcggcactaccttcatcagcatt
caagccagtctggaaaatctgaagcttgttggcgacgaaaagactggtgtagagattgta
aaacgggccattgaagaaccggtacgtcaaatcgctaacaacgcaggtcttgaaggttcg
gttgttgttgccaatgttaaaaaagccggtaagggtgttggcttcaatgctctgactgaa
gaatatgttgacatgattgctgcaggtattgttgatccggcgaaggttactcgctcggcg
ctgcaaaatgctgccagcatcgcggctatggttcttactaccgaaactctcattgccgat
aagcctgagaaagacggcggcgctgctgctgctatgggcggcatgggcggtatgggtggt
atgggcggcatgggcggtatgatgtag
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