Sporomusa sphaeroides: SPSPH_012430
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Entry
SPSPH_012430 CDS
T10405
Symbol
ftsH_4
Name
(GenBank) ATP-dependent zinc metalloprotease FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ssph Sporomusa sphaeroides
Pathway
ssph04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SPSPH_012430 (ftsH_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssph03019
]
SPSPH_012430 (ftsH_4)
03009 Ribosome biogenesis [BR:
ssph03009
]
SPSPH_012430 (ftsH_4)
04131 Membrane trafficking [BR:
ssph04131
]
SPSPH_012430 (ftsH_4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssph04147
]
SPSPH_012430 (ftsH_4)
Messenger RNA biogenesis [BR:
ssph03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SPSPH_012430 (ftsH_4)
Ribosome biogenesis [BR:
ssph03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SPSPH_012430 (ftsH_4)
Membrane trafficking [BR:
ssph04131
]
SNARE
SNARE associated proteins
Others
SPSPH_012430 (ftsH_4)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SPSPH_012430 (ftsH_4)
Exosome [BR:
ssph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPSPH_012430 (ftsH_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
AAA_22
AAA_2
AAA_5
RuvB_N
AAA_14
AAA_33
AAA_28
TIP49
AAA_18
nSTAND3
Sigma54_activat
CDC48_2
AAA_24
DUF815
AAA_7
Mg_chelatase
RNA_helicase
ATPase
IstB_IS21
AAA_19
AAA_3
TsaE
AAA_30
NPHP3_N
ABC_tran
Zeta_toxin
SLFN-g3_helicase
AAA_lid_PRS2_C
Parvo_NS1
bpMoxR
AAA_29
AAA_17
Vps4_C
Motif
Other DBs
NCBI-ProteinID:
WXA38540
LinkDB
All DBs
Position
1399327..1401441
Genome browser
AA seq
704 aa
AA seq
DB search
MAITLSFRVADAMPEDVGQGYVRIDNDEMDKLEVIIGDIVEIQGRKTTAAKVVPCFTQFR
NKNLAQLESIIRENAGVGIDERVTLKKAVRQPAQIVVLSPLDVSVDFSDAQDIQHLERML
NGLPVLIGDKVKVRLAGAQNQFFTVLGTNPQGPVIINTGTKLKVTREDATEDRKFRASYE
DVGGLDKELQRVREMIELPLKYPEIFRHLGVDAPKGVLLYGPPGTGKTLMARAVASETNA
AFLHVNGPEIINKFYGESEARLREMFETAQRRAPAIIFIDEIDAIAPKRTDVIGDVEKRV
VAQLLALMDGLKNRGQVIVIGATNVPDMVDPALRRPGRFDRELSINPPDRPGRLRILKIH
TRDMTTDSNIDLEKLAQITHGFVGADLAILCKEAGMNAVRRLLPQINFMSGISEEDLAGL
KVSMDDFYNAFREVEPTATREFFSDRPNTKWEQVGGLADIKDKLRSLVELPMQNPELFKE
ARYAMARGILLTGKPGTGKTLLVRALAGSSEAHFIAVDAATLNSRWFGEAEKGLRLIFKR
AKQIAPCILFFDEIDALAPVRAVSDRSGADRLVSQLLLEMDSLMDNANVIVLAATNRPDM
VDPALMRPGRFDFILELPLPEKQERCDIFKIHASKLPLAGDVDIAVLAAATEGATGSDIE
AVCKHASMLALKRAVSSMQNQAKLSGNYLVTGQDFGNGLRQIIK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggccattaccctatcctttagagtagcagatgctatgccggaagatgttggtcaggga
tatgtccgtatcgacaatgacgaaatggataaacttgaagttattattggtgacatagta
gaaattcagggcagaaaaacaacggcagcaaaagtagtcccctgcttcacacagtttcgg
aataaaaacctggcacagctggaatccatcattcgtgaaaatgccggagtcggcattgat
gagcgggttaccctgaaaaaggcagtgcggcaaccggcccaaatagtagtcttaagtccg
cttgatgtcagcgtagattttagcgatgctcaggatattcagcatttggagcgcatgtta
aacgggttgccggtgcttatcggcgacaaagtgaaagtgcgtttggcgggggctcagaat
cagttttttaccgttctcggaacaaacccccaaggcccggtaatcattaataccggtaca
aagcttaaagttacccgggaggatgcaaccgaagaccggaagttccgggcgtcatacgaa
gatgtaggcggtttggacaaagaactgcagcgtgtgcgggaaatgatcgaactgccgctt
aaatacccggaaatctttcgccaccttggtgttgatgctcctaaaggagtgttgctttat
ggtccgccgggcacgggtaagacactgatggcccgggcggtagccagcgaaaccaatgcc
gcattcctgcatgttaacggcccggaaattattaataagttttacggggaaagtgaagcc
cgcctgcgggaaatgtttgaaacagcacagcgccgggcaccggccatcatttttatcgat
gagattgatgccattgctcccaaacgtaccgatgtgatcggcgatgttgaaaagcgggtg
gtagctcagcttctggcgctaatggatggtttaaaaaaccggggccaggtcatcgtaatc
ggagccactaatgttcccgacatggtagatccggcgctcaggcggccaggacgctttgat
cgtgaactgtcaatcaatccgccagataggcctggaagattacgaatattgaaaattcat
acacgggatatgacaaccgattcaaatattgacctggaaaaacttgctcagataacgcat
ggttttgtcggcgccgatttagctattttgtgtaaagaagccgggatgaatgccgtaagg
cgcctgctgccgcaaatcaactttatgtccggtatatctgaagaggacttggctggttta
aaggttagcatggatgatttctataacgcatttcgggaagttgagccaacggccaccaga
gaatttttttccgaccggcctaataccaagtgggaacaggtcggtggtttggcagatatc
aaagataaattacggtcactggtagaactgcctatgcaaaatccggaattattcaaagaa
gcgcggtatgctatggcaagaggcatattgcttaccggcaaaccgggaacaggcaagacg
ctcttagtcagagcactggccggctcaagtgaggcacatttcatagcggtggatgccgct
acccttaattcacggtggttcggggaagcggaaaagggactcagactgatctttaaacgg
gcaaagcaaattgctccctgcatacttttctttgatgaaattgatgccttagcacctgtg
cgggccgtttcggacagaagcggtgccgatcgcttggtaagccaattattattggaaatg
gacagtctgatggataatgccaatgttatcgtgctagcggctaccaaccggcctgatatg
gtagatcccgcgcttatgcggccaggcagatttgattttattttggaactgccgctgccg
gaaaaacaggagcgctgtgatatattcaaaattcatgcaagcaagctgcccttagccggc
gatgttgatatagccgttttagcggcagcgaccgagggagccacaggctccgatattgag
gctgtttgcaaacacgcttcgatgctggctttaaaaagagcagttagtagcatgcagaac
caagccaagctatctggcaattacctggtaacaggtcaggattttggcaatggtctgcga
caaataattaaataa
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