Sporomusa sphaeroides: SPSPH_012840
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Entry
SPSPH_012840 CDS
T10405
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph00061
Fatty acid biosynthesis
ssph00071
Fatty acid degradation
ssph01100
Metabolic pathways
ssph01212
Fatty acid metabolism
ssph02024
Quorum sensing
ssph04146
Peroxisome
Module
ssph_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SPSPH_012840 (lcfB)
00071 Fatty acid degradation
SPSPH_012840 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPSPH_012840 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPSPH_012840 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssph01004
]
SPSPH_012840 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssph04147
]
SPSPH_012840 (lcfB)
Enzymes [BR:
ssph01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SPSPH_012840 (lcfB)
Lipid biosynthesis proteins [BR:
ssph01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SPSPH_012840 (lcfB)
Exosome [BR:
ssph04147
]
Exosomal proteins
Exosomal proteins of breast milk
SPSPH_012840 (lcfB)
Exosomal proteins of breast cancer cells
SPSPH_012840 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WXA38581
LinkDB
All DBs
Position
1444988..1446463
Genome browser
AA seq
491 aa
AA seq
DB search
MFVHELIQQGTPSSIAFHGKDYVTYAEFSQQVEKYRNYFYMSGIRTGENVGLFSRNSVDF
VYSYMAIVSLGAVVVPINFQLTARETAFIIKDAKMKQLVTMERLDLDDELAQLGYAQEVK
QLVLPDVRQDVEHQRLFAAPAISDEFDENRPCVIIYTSGTTGSPKGAVLSHKNLVSNAKA
FGEVLPVTAGDNVLCVLPMYHCFAWTCAILNALLCGASITVLEAFAPKETIAAIKEHGVT
VIYGVPPMYNLLTRVGQRDDLAGVKLLISGGASLPEKVAIQFADKYGIKILEGYGLSEAS
PVVALNPVEKPKYCSIGKALPGLEVTVVDEQGQSLPPGVVGEIVVRGPTVMLGYFNLPDE
TAKAMKDGWLHTGDLAYQDAEGYFFVVDRLKDLIIANGENIYPREIEELLYAYPGIIEAS
VIGVPDQLRGQVARAYIVLAEGQHFDKKAVREYLQSNIAAYKIPRDFIVVSALPKNQTGK
ILKRVLREQAG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgttcatgagcttattcagcagggtacgccaagcagcatagcttttcatggaaaa
gattatgtaacatatgctgagtttagccaacaggtagaaaaataccgcaattatttttat
atgtcaggtatccggaccggtgaaaatgtaggattgttttcgcggaattcggttgacttt
gtttactcgtatatggccattgtcagtctcggggccgtagtagtgcctattaacttccaa
ctgacagcacgggagacggctttcatcattaaagatgccaaaatgaagcagctggttacg
atggagcgtctggaccttgatgacgaacttgcgcagctgggatacgcccaggaggtcaaa
cagcttgtcctgccggatgtcaggcaggatgtagaacaccagcggctgtttgccgctccg
gctatatctgatgagtttgacgagaaccgcccctgtgtcatcatttatacttccggtact
accggcagcccgaaaggtgcggtgttatcccataaaaatctggtaagtaatgcgaaagct
tttggtgaagtgctgcctgttactgccggcgataatgtactatgtgtgctcccgatgtat
cattgctttgcctggacctgcgccatactgaacgccctgctttgcggagcgtcgattacc
gttttggaggcttttgcgcccaaagaaaccattgccgccattaaagagcatggcgtaact
gtcatttatggggtaccgcccatgtataacctccttacccgtgtcgggcagagggatgac
ctggcaggagtaaaactcctcatatccggcggggcgtcgctgccggaaaaggtggcgata
caatttgccgataagtatggtataaaaattctcgaaggttacggcctttccgaagcctcg
ccggttgtggccctaaatccggtagaaaagcctaaatactgttctatcggcaaagctctc
cccggcctggaagttacagtggttgatgagcaaggccagtctttgccgccaggggtggta
ggcgaaattgttgtccgcgggcccacggtgatgttaggctatttcaatttgccggacgag
acggccaaggcaatgaaagacggttggcttcataccggagatttggcttaccaggatgct
gaaggctatttctttgttgtcgaccgcttgaaggacttaattatagccaatggagaaaat
atttatccgcgtgagattgaggaattgctgtatgcctatccgggtattattgaggccagc
gtaattggtgtgcctgatcaactgcgcggtcaggtggcgcgcgcttatattgtgctggca
gaaggccagcattttgataaaaaagcggtcagagagtatttgcaaagcaatattgccgcc
tataaaatcccgcgggatttcattgttgtgagtgctttgccgaagaatcagacaggcaag
atattaaaacgcgtactccgcgagcaggcagggtga
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