Sporomusa sphaeroides: SPSPH_015960
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Entry
SPSPH_015960 CDS
T10405
Symbol
rnhC
Name
(GenBank) Ribonuclease HIII
KO
K03471
ribonuclease HIII [EC:
3.1.26.4
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPSPH_015960 (rnhC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssph03032
]
SPSPH_015960 (rnhC)
Enzymes [BR:
ssph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SPSPH_015960 (rnhC)
DNA replication proteins [BR:
ssph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SPSPH_015960 (rnhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
WXA38885
LinkDB
All DBs
Position
1769470..1770417
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AA seq
315 aa
AA seq
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MDMLNARLAVLKEGFAQAGFTITAEKPINYGWQVKVSDGQATVTVNIYNGKKGISIVVGG
SGSPLKTAVEAICAGKTPAAGGGAGKAQLIAGRPPGFEAVVDFDNKWIGLDESGKGDFFG
PLVVAAVLVDEQTADKLAAVGVKDSKALSDEKNRALAERIREECAHRFVELAWMPAEYNA
MYSKFNSAGRNLNHFLAFSHARALESLLTQEPAKFAIADQFAHERFIQAELLEKGQEITL
IQMHRAERNIAVAAASILARDRFLVSMAELSAQFGISFPKGAVQVVGVAREFAGKYGKAA
LNQVCKLHFKTFEQI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatatgctaaacgcaagactggcggttctgaaggaagggtttgcccaggcaggattt
acgataacggcggaaaagccgatcaattatggctggcaggtaaaggtttccgacgggcag
gccacagtgactgttaatatatataatggaaaaaagggcattagtattgttgtgggtggt
tctgggtccccgctcaaaacagccgtggaggccatttgcgcaggaaaaacgccggctgcg
ggcgggggtgccgggaaggcgcagctaattgccggacggccgccaggctttgaggctgtg
gttgattttgataataaatggattggtcttgatgaatcaggtaaaggcgatttctttggt
ccgctggtagtggctgcggtgttggtggacgaacagacggccgataaactggccgccgta
ggagtaaaagacagcaaagccctgtctgacgaaaaaaaccgtgctctggcagaacgtatc
agggaagagtgcgcacaccggtttgttgaattggcgtggatgccggctgagtataatgct
atgtacagcaagtttaacagtgccggtaggaacctcaatcattttctggccttttcgcac
gcccgggctcttgagagcctgctaacccaggagccggccaagtttgccatcgccgaccaa
ttcgcccacgaacgttttattcaggccgaactcttagaaaaaggtcaggagattacctta
atacagatgcaccgggctgagcgcaatattgccgttgccgccgcttccatcctggcgcgt
gaccgatttttagtcagcatggccgagctttctgcacagtttggcatcagctttcctaaa
ggggcagtccaggtagttggcgttgcccgggaatttgccggaaagtatggaaaagcggca
ttaaaccaagtttgcaagctccattttaagacttttgagcagatataa
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