Sporomusa sphaeroides: SPSPH_017120
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Entry
SPSPH_017120 CDS
T10405
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssph Sporomusa sphaeroides
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssph03032
]
SPSPH_017120 (topA)
03400 DNA repair and recombination proteins [BR:
ssph03400
]
SPSPH_017120 (topA)
Enzymes [BR:
ssph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SPSPH_017120 (topA)
DNA replication proteins [BR:
ssph03032
]
Prokaryotic type
DNA Topoisomerases
SPSPH_017120 (topA)
DNA repair and recombination proteins [BR:
ssph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SPSPH_017120 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DNA_ligase_ZBD
Zn_ribbon_recom
Auto_anti-p27
DUF7169
Motif
Other DBs
NCBI-ProteinID:
WXA39000
LinkDB
All DBs
Position
1876011..1878206
Genome browser
AA seq
731 aa
AA seq
DB search
MSKALVVVESPAKAKTIEKFLGKNYMVKASMGHLRDLPKSQFGVDIENNFSPKYINIRGK
GDLIKSLKDAAKNADTVYLATDPDREGEAIAWHLAHILNLSEHTTCRIEFNEITKPAIQQ
AIKKPRPINLPRVYAQQTRRILDRIVGYKLSPLLWRKVRKGLSAGRVQSVTVRLICDREK
EIQAFVPEEYWTITAKLKEKSTAKAFAAELFMVGSEKLNVNNQSQAETIVSELTHAEYVV
SDVKKRERKRNPYPPFTTSSLQQEAARKLGFTSRKTMMVAQQLYEGLDIGRAGQVGLITY
MRTDSTRIAETAQQEARAYIENKFGVSYLPAKAPVYANKKSQDAHEAVRPTTLELLPEAI
GKSLTKDQLKLYTLIWERFIASQMTPAVYDTLTIEITAGNYRLKATGSQLKFPGFLAAFS
GAIGKGKELEQNSDSDLDTETTLPELKTGQVLQLAKLEPKQHFTEPPPRYTEASLVKVLE
EKGIGRPSTYAPTIETIVVRGYVERVEKKFHPTDLGIVVLDLLKQYFERIIDVEFTAGME
DKLDAIAEGDASWLGVLEEFYDPFAKDLSFAEEAIGQVELPVEVSDIPCENCGKMMIIKQ
GRYGNFLACPGFPACRNTKPILKDIGVKCPKCGGAVVERKTKRRRIFYGCEKYPECDFTT
WDLPLNDNCPVCGTYMVRHKYKNGGFAALCSNESCPSRQTSENKETTKKAEGKAAKPTSN
KASANRRKKSG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaagctctagttgtagtagaatccccggccaaagccaagacaattgaaaaattt
cttgggaaaaattacatggtgaaagcttctatgggacatttgcgggatttgcccaaaagt
caattcggggttgatattgagaacaacttttcaccgaaatatattaatatcagaggcaag
ggcgatctgattaaaagtctaaaagatgcagcaaaaaatgctgatactgtttatctggcg
acagaccctgaccgtgaaggggaagctattgcctggcatctggcccatattcttaatctt
tcggagcatactacctgccgcattgaatttaatgaaattactaagccggctattcagcag
gctatcaagaaaccacgtcccattaatctgccgcgggtatatgctcagcaaaccagacgg
atacttgacaggatcgtaggctataaacttagcccgctgctttggcgcaaagtgcgcaaa
gggttaagcgccggccgggtgcaatcggtcaccgttcgtctcatttgcgaccgggaaaaa
gaaatccaggcttttgttccggaagagtattggacaattaccgcaaagttaaaagaaaaa
agtacagccaaagcatttgctgccgaattatttatggttggcagcgaaaagctgaatgtc
aacaaccaatcgcaggcagaaaccattgttagtgagcttacccatgccgaatatgtagta
agcgacgtgaaaaagcgtgagagaaagagaaatccatatcctccgtttaccaccagcagc
ctgcagcaggaggctgcccgcaaattaggctttacttcccgcaaaacaatgatggttgcg
cagcagctgtatgaaggccttgatattggccgggccggtcaggtcggtcttattacttat
atgcgtaccgattccacccggatagctgaaactgctcagcaggaagccagagcctatatt
gaaaacaagtttggcgtgagctacctgccggctaaagcgcctgtctacgccaataagaaa
tcccaggatgctcacgaagcggtcagacctaccactcttgagctgttgccggaagctatc
ggcaaaagtttgaccaaagaccagttaaagctctacacgcttatttgggaaaggtttatt
gccagccagatgacaccggctgtctacgatacccttaccattgagattaccgccggaaat
tacaggcttaaagccacaggctcacaattaaaatttcccggattcttagccgcttttagt
ggagctatcggtaaaggcaaggaattggaacaaaactctgacagtgatcttgatacagaa
actactttgcctgaactaaaaacagggcaagtcttacagcttgccaaactggaacctaag
caacactttaccgaacctccgcctcgttatacagaagcttccttggttaaagtactggag
gaaaagggcatcgggcgtcccagcacctatgcgccgaccattgagacgattgttgtccgg
ggttatgtagagcgtgtggagaaaaagtttcatcctaccgatctggggattgtggtgctt
gatctcctaaaacaatacttcgagagaatcattgatgttgagtttactgcggggatggaa
gacaaactagacgctatcgccgaaggtgacgcctcttggctaggtgttttggaagaattc
tatgatccttttgctaaagatttaagttttgccgaagaagctatcgggcaggtggaactg
cctgttgaagtttccgacattccttgtgaaaactgtgggaaaatgatgattattaagcaa
gggcggtatggaaatttcctggcatgtccgggttttcccgcctgccggaataccaaaccc
attttgaaagatatcggcgtgaaatgtcctaaatgcggtggtgcggttgtcgagaggaag
actaaacggcgcagaattttttatggttgtgaaaaataccctgaatgtgactttactacc
tgggatctgccgttaaacgataactgtcccgtatgcggcacctatatggttcggcataaa
tataaaaatggcggctttgccgctctttgcagcaacgagtcttgcccgtcacggcaaacg
tctgagaataaagaaacaacgaaaaaagcagaaggcaaggcagcaaagccaacttccaac
aaggcttctgctaaccggaggaaaaagagtggctaa
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