Sporomusa sphaeroides: SPSPH_018030
Help
Entry
SPSPH_018030 CDS
T10405
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssph Sporomusa sphaeroides
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssph03009
]
SPSPH_018030 (rimO)
Enzymes [BR:
ssph01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SPSPH_018030 (rimO)
Ribosome biogenesis [BR:
ssph03009
]
Prokaryotic type
ribosomal protein modification factors
SPSPH_018030 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WXA39091
LinkDB
All DBs
Position
1966104..1967438
Genome browser
AA seq
444 aa
AA seq
DB search
MLKAGFVSLGCAKNLVDTEVMLGILADNNITITDDPHAADILIVNTCGFIDSAKEESIST
IIQMADFKREGKCRGLIVAGCLGQRYQQELLDELPEVSAIVGTGAWHRIMEAVQAVLAGE
RLLLIGETDTIYDENMRRITTTPSYSAYVKIAEGCSNCCSYCVIPLVRGKYRSRTVESIV
SEVKNLTAQGVKEINLIAQDTTSYGRDRYHTPQLTALLKELVKIDGLLWIRLLYCYPKYF
NDELIETIANEPKICKYIDMPLQHADDEILAAMNRRDTRADIETLLTKIRTSIPGVVVRT
SFIVGFPGESDAHFETLKQFMLAQKFERVGVFSYSQEEGTPAGALAQQVPDAVKEERYHE
LMALQCQISGELNRQMEGKELTVLIEGHNSEQPDVAFGRSYREAPEVDGRIFVENAGGLV
PGTVVQAEVVQGFTYDLLAEKKPD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaagcaggatttgttagtttaggatgtgccaaaaacctggtagatacggaagta
atgctggggattttggctgataacaatataactattaccgatgacccacatgccgccgat
atcctgatagtcaacacctgtggatttatagactctgccaaagaagagtctatttccacc
attattcagatggctgattttaaacgggaaggtaaatgccggggacttattgttgccggc
tgtctggggcagcgttatcagcaggaattattagatgaattgccggaagtatcggccatt
gtcggtaccggcgcctggcaccggattatggaggcagtacaggctgttctggccggtgag
cgtcttttgcttattggtgagacagataccatttatgatgaaaatatgagacgtattacc
actaccccttcttatagtgcttatgtaaaaattgccgaaggctgtagtaattgctgttcc
tattgtgtgattccgctggtacggggaaaatatcgcagccgtacagtagaatccattgtc
agtgaggtaaaaaatctcaccgcgcaaggtgtaaaagaaataaatttgattgcccaggac
actaccagttatgggcgtgaccgttatcatacgccgcagttaacagccttgcttaaagaa
ttggtaaaaatcgacggactgctttggattcggctgctttattgctatcccaaatatttt
aatgatgaacttattgaaacaattgccaacgaacctaagatttgcaaatatattgacatg
ccgctgcaacatgctgacgatgaaatattagcggccatgaaccgccgcgatacacgggcg
gatattgaaacattactaactaaaattcgaacttccatccctggcgtagttgttcgtact
tcattcattgtcgggttcccgggtgaatcagacgcgcactttgaaaccttaaagcaattt
atgctggcgcaaaagtttgaacgggtaggtgttttttcctactcccaggaagaaggcaca
ccagccggggctttggcgcagcaggtgcctgacgcggttaaagaagaacgctatcacgaa
ctgatggccttgcaatgccagatttctggagaactgaatcgccagatggaaggaaaagag
cttacggtactgattgaaggccataatagcgaacagcctgatgtggctttcggcaggtca
taccgggaagcgcctgaggtggatggacggatttttgtggagaacgctggcgggctggtc
cccgggacggtagtacaggcagaggttgtacaaggatttacgtacgatctgttagctgag
aaaaagccggactag
DBGET
integrated database retrieval system
