Sporomusa sphaeroides: SPSPH_020110
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Entry
SPSPH_020110 CDS
T10405
Symbol
pbpF
Name
(GenBank) Penicillin-binding protein 1F
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph00550
Peptidoglycan biosynthesis
ssph01100
Metabolic pathways
ssph01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPSPH_020110 (pbpF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SPSPH_020110 (pbpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssph01003
]
SPSPH_020110 (pbpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssph01011
]
SPSPH_020110 (pbpF)
Enzymes [BR:
ssph01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
SPSPH_020110 (pbpF)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SPSPH_020110 (pbpF)
Glycosyltransferases [BR:
ssph01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SPSPH_020110 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssph01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SPSPH_020110 (pbpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Herpes_US9
Motif
Other DBs
NCBI-ProteinID:
WXA39289
LinkDB
All DBs
Position
complement(2155880..2158081)
Genome browser
AA seq
733 aa
AA seq
DB search
MQDKNNENKESGRRRPKKNFRAVTIIAILVFLVMLTGASLGFLTASIHTIPSLKGEIRPA
VSSQIFDVNGKLITTIHSVENRLPVSINKIPKNLQNAFIAAEDVRFYQHSGIDPRGILRA
IWSNITNRGIAEGGSTITQQLARNALLSQDQTIKRKIQEAFLSLQIERQYSKQEILEMYM
NQIYFGQGAYGVQTAAQIYFGKNVEDLNLAECAMIAGIPKSPNYYSPSSNLKAAKERQSV
VLDQLVKYDYIDSATALKAKNTEIKLVNRNTTTTATASYFTDYVLQLLIEKYGADAVYKD
GLKVYTSLDIEMQTAAEQAMNQLLPTRRTENGIKQPQGALVAIDPHNGHIKAMVGGRGND
QFNRAVLAERQPGSAFKPFVYLAALESGFTPASIIDDKPISFGSWSPMNYDRRFRGPVTM
RTALEQSLNVVTVKLAQQVGIDKTLYYAQQMGISTLVLTGNTNDRNLAMSLGGLTRGVTP
LEIASAYGVLANGGVRVEPLAIIKVVDRNGKVIEETLPRERVVVNERSAYLLTDMLRGAI
NQGTGAGAYFGRPAAGKTGTTSDYKDAWFVGYTPDLAAAVWMGYDNADYLSGITGGTIPA
TIWQSFMREASTKYVARDFVKPSGIVTARISTQDGLLLNDAASKEARDELFAEGTQPTKV
STVTATKDDNDKKDGKDNAANNDGKNPAQTGNTEGSDTTEQIPPPPPAKNSKNTIDPALP
PPPPKPTDSNKKN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaaaataacgaaaataaagagtcaggccgacggcgtcccaagaaaaatttc
cgggcagttaccatcattgccatacttgtgttcttagttatgttaacaggtgcaagcctt
ggatttttgacggccagcatccatactattcccagcctgaagggggaaatacgtccggct
gtctcttcccaaatttttgatgtaaacgggaagctcataacaaccatccattcagtagaa
aaccggttgccggtatctataaataagataccaaaaaatttacaaaatgcatttattgca
gcagaagatgtccgtttctatcagcatagtggtattgatccccggggtatcctgcgagct
atctggtctaatataaccaatcgcggcatagctgaaggcggcagtaccataactcagcag
ctagccagaaatgctttactttcacaagatcagacaattaagcgtaaaatccaggaagcc
tttttatccttgcaaattgagcggcaatacagcaagcaggaaatactagaaatgtatatg
aaccaaatttattttggtcaaggtgcctatggcgtgcaaacagctgcccaaatttatttt
ggcaaaaatgttgaagatttgaatttagccgagtgtgctatgattgccggcatacctaag
agtcctaattattattccccttccagcaatttaaaagccgctaaagaacggcagtctgta
gtattagaccaactggttaagtatgattacattgattcggccaccgctttgaaagccaag
aacaccgaaataaaactggttaaccgtaacactactactactgcgaccgcttcctatttc
accgattatgtactgcaattgcttatcgagaaatatggtgcagatgccgtatataaagac
ggcttgaaagtatatacctctttggatatcgaaatgcaaaccgcagcagaacaggctatg
aatcaactgctgccgacacgccgtaccgaaaatggcatcaaacagccccaaggagcttta
gtggctattgaccctcataacggtcatatcaaagcaatggtaggcggccgtggaaacgat
cagtttaaccgtgcagtactagccgaacgccagccgggctctgcctttaaaccgttcgtt
tacctggctgctcttgaaagcggttttacaccggccagcattattgatgacaagcccatt
agctttggcagttggtcgccaatgaattacgatcgacgctttcgcggtccggtaactatg
cgtactgcccttgagcaatcactaaatgttgtaaccgtaaaattagctcagcaggtcggt
attgacaaaacattatattatgcacagcaaatgggtatctccacactggtccttaccggt
aataccaatgaccgcaatttggccatgtcattaggtggccttacccgtggtgtcaccccg
ctggagattgccagtgcctatggagtgctggcaaatggcggtgtacgggttgagccgcta
gctatcattaaagttgtcgaccgcaatggtaaagtaattgaagaaacccttccccgtgaa
agggtagttgtcaatgaacgaagcgcatatctgcttacagatatgctgcggggagctatt
aatcagggtaccggggcaggtgcctactttggccgtccggcagctggaaaaaccggtact
accagcgattataaggacgcctggtttgtcgggtatacgcctgatttagcagcagctgtt
tggatgggttacgacaatgccgactatctgagcggcatcaccggcggcacaataccggca
acaatttggcagagttttatgcgggaagcttccaccaaatatgttgcccgtgattttgtg
aagccttccggcatcgttaccgccagaatatccacccaggacggtttactcctcaacgat
gccgccagtaaagaggcccgtgatgagctttttgccgaaggcactcaacctaccaaagtt
tcgacagttactgcaaccaaggatgataatgataagaaagacggcaaggataatgctgct
aacaatgatggtaagaatccagcccagactggtaataccgaaggttcggacacaacagag
caaattccaccgccaccgccagcaaagaacagcaaaaataccattgacccggcactaccg
ccaccaccgcccaaacctactgattctaacaagaaaaattag
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