Sporomusa sphaeroides: SPSPH_021710
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Entry
SPSPH_021710 CDS
T10405
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SPSPH_021710 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssph03400
]
SPSPH_021710 (priA)
Enzymes [BR:
ssph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPSPH_021710 (priA)
DNA repair and recombination proteins [BR:
ssph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPSPH_021710 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
SLFN-g3_helicase
AAA_16
PIF1
AAA_19
SWI2_SNF2
TrwB_AAD_bind
AAA_30
Zn_ribbon_6
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WXA39447
LinkDB
All DBs
Position
complement(2302577..2304997)
Genome browser
AA seq
806 aa
AA seq
DB search
MANTAQIIVNIPARSITKPFSYIIPAHLPEITIGWRVLVPFGNRKVEGFVVGVEPECTEG
LKAILAILDDYPWFDDNMLKTAKWISQYYLSSLAEAMRLFVPGLSGVKTQKAYQASAAMD
YEAAAMLLDNKPEEYRQALTYIYAHGPVSLKDLAKLPGNIDAMIKFFLQHKLIIHADTVN
TRGKASTTTIINLAVSKETAAQAEQMLPKTRAAQRRLLQALLQNNELALPQLRHLNISQA
TVKKLAEQGLITSRSVPVLRNSYDSVCQQAAEVSLTQPQQHALQLIIPAIKAGTHKSFLI
HGVTGSGKTLIYIKAVAEARRHNRQAIVLVPEIALTSQLVARFRAAFGNDVVVIHSKLSV
GERHDAWRRLQSGQAGIVIGARSALFAPARDLGIIIIDEEHEFTYKQEESPRYHARQVAL
IRARLAGAALVLGSATPAIETYFQALNGTHTLISMNKRVDDVPMPEVTLVDMRQELAQGR
RSVISLPLQEMLARALAKKEQAVILLNRRGYSTFVLCRECGHVLKCRHCDISLVYHTPGN
SLRCHYCQERHTVPDTCPECGSRYIRYFGAGTQKVEEALTALFPAAKIVRMDQDTTRGKM
AHDKILAAFAAGTYDILLGTQMVAKGHDIPNVTAVGIISADTALNLPDFRAAERTFALLT
QAAGRAGRGAKSGQVVMQTYNPEHYAITAGAEHNYPAFYEHEIAFRRQLNYPPFANLIKI
TVQAADEIMVHQSANKLAVELAQAMAGIAADIIGPFPASVHKIKDVFRINILIKTKDPAA
VTSLFTALHISSRKDVIIDVDPVNVI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaccgctcaaattattgtaaatattcctgcccgcagcattactaagcctttt
tcctacattattccagctcacttacctgagatcactatcggctggcgtgtattagttccg
ttcggcaacaggaaggtagaagggttcgttgtcggtgtggaacccgaatgtacggaaggc
ttaaaagccatccttgctatacttgatgattacccctggtttgatgacaatatgttgaaa
acagccaaatggataagccagtattatctcagttcactggccgaagccatgcgtctgttc
gttcccggcctgtcgggagtaaaaacgcaaaaagcctatcaggcatctgccgcaatggat
tatgaagcggcagccatgctgctcgacaacaagccggaggaataccgccaggcactcacc
tatatttatgctcatggtccggttagtctcaaagatcttgccaaacttcccggtaacata
gatgctatgataaaattttttttacaacataaactaattattcatgcagatactgtcaat
acacgcggcaaagccagtacaacgacgattattaacttggctgtcagcaaggaaactgct
gctcaagctgagcaaatgctgcccaaaaccagggcagcccagcgccggcttttgcaggca
ctcctgcagaataatgaacttgccttgccccagttgcgccaccttaatatttcgcaagcc
actgtaaaaaaattagcagaacaagggctcattaccagccgcagtgtaccggtactccgc
aacagctatgacagcgtttgtcagcaggctgccgaggtatcattgacacaaccgcagcag
cacgccttacagctaataattccagccattaaagccggaacgcataaatcttttttgatt
cacggcgttaccggcagcggcaagacgcttatttatatcaaggctgtcgctgaagcccgg
cgacataatcgccaggccattgtcctggtgccggaaattgctttgaccagtcagcttgtc
gcccgttttcgggcagcgtttggcaatgatgttgttgttatccacagcaaactatcagtc
ggcgaacggcacgatgcctggcgccgcctccagtccggccaggctggcattgttattggt
gcacgttcggctttatttgcacctgcccgcgatctgggcataataattatcgatgaagaa
catgagtttacttacaaacaggaagaatctccccgttaccatgcccggcaggttgcctta
atccgggccagactggccggtgcagccctggtactgggcagcgctaccccggcgatagaa
acttacttccaggcacttaacggcacccatacgttaatctctatgaataaacgggttgat
gatgtgccaatgccggaagttacacttgttgatatgcgccaggaattggcacaaggacgc
cgcagcgtcatttcactgccactgcaggagatgttagccagagccctggcaaaaaaggag
caagccgttatcctgcttaaccgtcgcggctattctacctttgtcctgtgccgcgaatgc
ggccatgtgctcaaatgcagacattgtgatatttcactggtatatcacacccccggcaat
agccttcgctgccattactgtcaggaacgccatactgtgcctgatacttgtcctgaatgc
ggcagccggtatatccgttattttggcgccggtacccagaaggtggaagaggcacttacc
gcattatttccggcggcaaaaattgtgcgtatggatcaggacaccacccgaggcaaaatg
gcacatgataaaatattagcggctttcgctgccggaacgtatgatattttgttaggcaca
caaatggtagccaaaggtcacgacattcctaatgtaacggcagttggaattatctcggca
gatactgcgcttaatctgcccgacttccgggcagctgaacggacatttgcgctcttgacg
caagcggcagggagagcaggacgcggcgcaaagagcgggcaggtagtaatgcagacatat
aatcccgagcactatgcgataactgccggagcagagcataattatccggcattttatgaa
catgagattgcctttcgccgtcaactgaactatccaccgtttgctaatttgataaaaata
acagtacaggctgccgacgaaatcatggtgcaccagagtgctaacaaattggcagtcgaa
ctggctcaagcaatggcgggaatagctgccgacattattggaccgtttccggcatcggtt
cataaaataaaagacgtctttcgcattaatattttaatcaaaacaaaggatccagctgcc
gtgaccagcctgttcacagctttgcacattagcagccgcaaagatgtgattattgacgta
gaccctgtgaatgtcatctaa
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integrated database retrieval system
