Sporomusa sphaeroides: SPSPH_026770
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Entry
SPSPH_026770 CDS
T10405
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph03420
Nucleotide excision repair
ssph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPSPH_026770 (pcrA)
03430 Mismatch repair
SPSPH_026770 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssph03400
]
SPSPH_026770 (pcrA)
Enzymes [BR:
ssph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPSPH_026770 (pcrA)
DNA repair and recombination proteins [BR:
ssph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPSPH_026770 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SPSPH_026770 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_14
AAA_11
CLASP_N
Etd1
Motif
Other DBs
NCBI-ProteinID:
WXA39918
LinkDB
All DBs
Position
complement(2825030..2827252)
Genome browser
AA seq
740 aa
AA seq
DB search
MNNIFDRLNPAQQEAVAHVNGPLLIMAGAGSGKTKVLTSRIANLLAQGVAPYNILAITFT
NKAAAEMKARVAGIVGLVAKDIWLSTFHAFCAKFLRMEIENLGGYTRNFVIYDAGDSQSL
IKTCLKELNLDEKQFTPGGVQSTISNAKNALQDVREFTSQADNFYNLRVAEVYKLYQSKL
KVHNALDFDDLLMLSVELLEYNATVREKYQQKFHYILIDEYQDTNRAQYLLARRLAAKHR
NICVVGDVDQSIYAWRGADIQNILDFESDYPDAKVIKLEQNYRSTQTILDAANAVIENNC
NRKPKSLWTDNQAGDTITHYLAMDERDEARYITDNIVKLNTVYRTPYKDIAILYRTNAQS
RTIEEGLRNAAIPYTMVGGLRFYDRKEIKDIMAYIKVLFNPADAVSLLRIINVPRRGIGN
TTIGRLEEYAAGQGVPLFDAVSNPDLVPGLTKRAKHQLEGLAELIFNLMSCQNTLPVPEL
VDKVMRDSGYLAELEADSDPQAMSRIENLKELVSDAKKFAETEAENTLEEFLSHVSLLTD
LDNNEFSDDKVTLMTLHSAKGLEFPVVFLAGLEEGIFPHVRTLMDEREIEEERRLCYVGI
TRAERKLYISNARQRMIYGNTVCYSPSRFLDEIPPELMERYAPGRPAYLSSMPGSRPVAA
ASLPKAAVKPELTILKSPVQNPAKPQNLEWKAGEKVYHAKWGTGTVVAVSGSGDNMQLSI
AFPNEGIKKLLAQLAPISRV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaataacatatttgaccgcttgaacccggcgcagcaggaagctgttgcccatgtaaac
gggccgctcctaatcatggctggagccggttcaggcaagaccaaggtcctgacaagccgg
attgccaatctcttagcacagggagtggcaccttataatattctggccataacctttacc
aacaaagcggctgccgaaatgaaagcgcgggtggccgggatcgttggcctggttgccaaa
gatatttggctgagtacctttcatgccttctgcgccaaattcctgcggatggagattgaa
aacctgggcggctatacccgcaatttcgtcatctatgatgccggcgattcgcagtcgctg
atcaaaacctgtctgaaggaactcaaccttgacgaaaagcagtttacgcccggcggcgtg
caatccaccatctctaatgccaagaatgcgctgcaggatgtgcgggagttcacttcgcag
gccgacaatttttacaatctcagagtagccgaagtgtacaagctgtaccagagcaaactc
aaagtccataatgcgctggattttgacgatctcctgatgttgtcggtggaactactggaa
tataatgccacggttcgggaaaaatatcagcaaaaatttcactacatcctaatcgacgag
tatcaggataccaaccgtgctcaatacctgcttgcccgacgtctggcggccaaacatcga
aacatctgcgtggtaggtgatgttgaccagagtatttatgcctggcggggtgcggatatt
cagaatatccttgattttgaatccgattatccggatgccaaagtcattaaattagagcaa
aattaccgttccacccaaacgatactcgatgccgccaatgctgtcatcgaaaacaattgc
aaccgcaagcccaaatcattatggacagataaccaggcaggcgataccataactcactat
ctggcaatggatgaacgggacgaagcccggtatatcaccgataatattgtgaaactcaat
acggtgtatcgtacaccttataaagatatcgccatattgtaccgtaccaatgcccagtca
cgcaccattgaggaaggcctgcgcaatgccgctattccttataccatggtgggcggcctc
aggttctatgaccgtaaggaaataaaagacatcatggcgtatatcaaggtgcttttcaac
ccggcagatgccgtcagcctgctgcgtattatcaatgtgccccgccgggggattggcaat
actaccattggccggctggaagaatatgcggccgggcagggtgtgccgctgttcgatgcc
gtgtccaaccctgacttggtgccgggacttactaagcgggctaagcatcagctggaaggg
ctggccgaattgattttcaatttgatgtcctgccagaatacgctgccggtgcccgaactg
gtggataaagtcatgcgcgattccggttatctggccgagctggaagccgacagcgacccg
caggcgatgagccgcattgaaaacttaaaggaacttgtcagtgacgccaaaaaatttgcc
gagaccgaagcggaaaatacgctggaagaatttttaagccatgtgtcgctgctgacagat
cttgataataatgaattctctgatgacaaggtgaccctcatgaccctgcattcggccaaa
gggctggagttccctgtcgtgtttcttgccggactggaagaaggtatcttcccccatgtc
cgcaccctgatggacgagcgggaaattgaggaagaacggcggttgtgttatgtcggtatc
acccgggctgagcgcaagctgtatatatccaatgcccggcagcgcatgatttacgggaat
acggtatgctattcgccgtcccggttcctggatgaaataccgcctgagctcatggaacgc
tatgcgcctgggcgccctgcctatttgtcatccatgcccggcagccgtccggttgccgcc
gcttcgctgcctaaggcagcggtcaaaccagaactcactatcctgaaaagcccggtgcaa
aacccggctaagccacagaacctggaatggaaagccggggaaaaggtgtatcacgccaag
tggggcacaggcacggtggtggccgtcagcggcagtggtgacaatatgcagcttagcatt
gcctttcctaatgaaggcatcaaaaaactgctggcccaactggcgccaatcagcagagtc
taa
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