Sporomusa sphaeroides: SPSPH_030670
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Entry
SPSPH_030670 CDS
T10405
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
ssph Sporomusa sphaeroides
Pathway
ssph03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPSPH_030670 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssph03400
]
SPSPH_030670 (uvrB)
DNA repair and recombination proteins [BR:
ssph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPSPH_030670 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SPSPH_030670 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_7
AAA_5
AAA_16
DUF4778
DUF7158
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WXA40283
LinkDB
All DBs
Position
complement(3254008..3256092)
Genome browser
AA seq
694 aa
AA seq
DB search
MATVPKLNTVHHEGSIPFKVEAPFVPTGDQPAAIVQLAEGIKQGDAAQVLLGATGTGKTF
TMAKVIEAVQKPTLVIAHNKTLAAQLASEFKEFFPNNAVEYFVSYYDYYQPEAYIAQTDT
YIEKDASINDEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPDEYRGLVLSLRQGQLK
DRDEILRKLVDIQYERNDYNFTRGTFRVRGDVVEIFPAAYGEKALRVELFGDEVERILEI
DTLTGEIVGERKHIAVYPASHYVTSRENMLRAVQDIEAELDDRLASLRAGNKLLEAQRLE
QRTRYDLEMMLEMGYCSGIENYSRHLTQRQPGESPYTLVDYFPEDFLIVIDESHVTLPQI
RAMYAGDRSRKESLVENGFRLPSAFDNRPLTFDEFVERINQIVYVSATPAAYELKAASQV
AQQIIRPTGLIDPEIEVRPIKGQMDDLLDEIKLRTAANERVLVTTLTKKMAENLTEYLKG
MGIKVTYLHSDIATIERVEIIRDLRAGVHDVLVGINLLREGLDMPEVSLVAILDADKEGF
LRSETSLVQTIGRAARNVHGKVIMYADTITDSMRRAMGETERRREIQMAYNTKHGITPKT
IEKRVKELIETTRVAETPAEYKADRIGNMQRADMLDLADNLEKEMRQASRQLEFERAAEL
RDMIVELRQKAGGGTGKGKTAGKTGSKTNKARKK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgtaccaaaactcaataccgtccaccatgagggcagtattccgttcaaggtg
gaagcgcccttcgtgccgacaggtgatcagccggcagctattgtccaattggctgaaggc
atcaaacagggtgatgccgctcaggtgctgctgggagctaccggtaccggtaagaccttt
actatggccaaagttattgaggctgtacaaaagccgactttggtcatagcccataacaaa
accctggcggctcagctggccagtgagtttaaggagtttttccccaataatgctgttgaa
tattttgtcagctattatgactattatcagcctgaggcctatattgcgcagaccgatacc
tatatagaaaaagacgcttccatcaatgatgaaattgataagctgcgccactcggccacc
agttcgctgtttgaacggcgggatgttattatcgtggccagtgtttcctgcatttatggt
ttgggttcgccggatgaataccgggggctggtgctgtcgctgcggcagggtcagctaaaa
gacagggacgaaatcctgcgtaagcttgtcgatatccagtatgagcgcaatgattacaat
tttacccggggaaccttccgggtccgtggtgatgttgtggaaattttcccggcagcctac
ggggaaaaggctttgcgggtcgaattgttcggcgatgaagtggaacgtattttggagatt
gacaccctgactggtgaaattgtcggggaaaggaaacatattgcggtttatccggcctct
cactatgttacctcccgggaaaacatgctgcgggcagtgcaggacattgaagccgaacta
gatgaccgcctggcctctctgcgggccggcaataagctgctggaggcccagcgcctggag
cagcgcacccgctatgacctggaaatgatgctggaaatgggctattgttcaggcatcgaa
aattactcccgccacctgacccagcgtcagccgggagagtctccctatacgctggtggat
tattttccggaggattttctgattgttattgacgaatctcatgttaccctgccccagatt
agggccatgtatgccggcgaccgttcacgcaaagaatcgctggttgaaaatggcttccgt
ttaccctcggcgttcgataaccggccgctgacctttgatgagtttgtcgagcggattaat
cagattgtctatgtttcggccacaccggctgcttatgaactgaaggcagccagtcaggta
gcccagcaaattatccggccaaccggacttattgatcctgaaattgaagtacgtcccatc
aaagggcagatggacgatttgctggatgaaatcaagctgcgcacagccgccaatgagcgg
gtgctggttactaccctgaccaagaagatggcggaaaacctgacagaatatctaaaaggc
atgggcatcaaagtaacctatctccattctgatattgcgacaatcgaacgggtggagatt
atccgggatttgcgggccggggtgcatgatgtgcttgtcggtatcaacctgctcagggaa
ggcctggatatgccggaagtatcgcttgtcgctatcctggatgccgacaaagagggtttc
ctgcgttcagagacctcgctggtacagaccatcggccgcgctgcccgtaatgtccatggc
aaggttattatgtatgccgataccatcaccgactccatgcggcgggcgatgggtgagacc
gaacgacgccgcgagattcagatggcttataataccaagcatgggattacgccgaaaacc
attgaaaaacgggttaaagaacttatcgaaaccaccagggttgccgaaactccggctgaa
tataaagccgaccgtattggcaatatgcagcgtgccgatatgctggacttggcggacaat
ttggagaaagaaatgcgtcaggcctccagacagctcgaatttgagcgggcggctgaactt
agagatatgattgtcgaactccggcaaaaagccgggggtggaacaggtaaaggcaaaaca
gccggcaaaaccggcagtaagacgaataaagccaggaagaagtag
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