Sporomusa sphaeroides: SPSPH_031310
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Entry
SPSPH_031310 CDS
T10405
Symbol
rocR_5
Name
(GenBank) Arginine utilization regulatory protein RocR
KO
K06714
arginine utilization regulatory protein
Organism
ssph Sporomusa sphaeroides
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssph03000
]
SPSPH_031310 (rocR_5)
Transcription factors [BR:
ssph03000
]
Prokaryotic type
Helix-turn-helix
Other families
SPSPH_031310 (rocR_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS_9
PAS_4
AAA
AAA_5
PAS
Mg_chelatase
AAA_2
AAA_7
PAS_8
AAA_19
TsaE
NB-ARC
HTH_10
nSTAND3
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WXA40347
LinkDB
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Position
3325777..3327246
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AA seq
489 aa
AA seq
DB search
MVKKTYEELESENRLLHAMFDVVSDGAYAVSVDGTVLFYNKAFEKMEGTTRSQMVGKKDF
DVYPGFENFQRHVVCKNPEPLRDQHMTYTSISGKKVDIVYNSYPFFQDGKLSAVISIGRD
KPSINELVTMVLNSFNSKKSNRVTNGTIYTLEDIIGSSTVIRQTLKQARKMAQSQSTVML
VGETGTGKELFAQGIHNASPYKSRPFIAVNCAAIPETLMESLMMGTVKGAFSGALDTPGF
FEQAENGTLFLDEINSLSISLQAKLLRLLQDKKIRRLGDNKERKISCRIISATNQDLFAL
AKSGLFREDLLYRLTPVIADIPPLRERLEDIPLLAREFVDRFNDELALNIKIISQDLMQL
FLYYRWPGNVRELEHIIESAMSLAENTETILSREHLPRMLKKRLMSDQTKSGSSDSEAGA
NKSLAELLRQYEKETIENALILKNGNVSQCAIQLGITRQNLHYHLRRHGIKAVLYKAQSV
GDATDSPVP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaaaacgtatgaagagctggagtctgaaaaccgcttattgcatgccatgttt
gatgtagtatccgacggggcttatgcagtaagcgtggatggcactgttctcttctacaac
aaagcctttgaaaaaatggaggggacaacccgcagccagatggtgggaaaaaaagatttt
gacgtatatccgggatttgaaaacttccagcggcatgttgtatgcaaaaatcccgaacca
ttgcgggatcagcatatgacctatacgtcgataagcggcaaaaaagttgatattgtatat
aattcctacccgttttttcaggatggaaaattatctgccgtcatttccattggcagagat
aagccctccataaacgaattagttaccatggtgctaaattcatttaacagtaaaaaatct
aacagagtcaccaatggcaccatctatacgttggaagatattatcggcagcagtaccgtc
atccggcaaaccctgaaacaagcccgcaaaatggcgcagagccagtctaccgtcatgctt
gtgggggaaacaggcacaggtaaagagttgtttgcccaaggtatacataacgccagtcct
tacaaatcccgcccctttattgccgtaaactgcgccgcaatcccggaaacactgatggaa
agcctgatgatgggaactgtaaagggtgcattttccggagcattggatacgcccggtttt
tttgagcaggctgaaaatggaactttatttttagatgaaataaactcgctgtctatttcc
ttgcaagcaaaactgctaagattactgcaggataaaaaaatacgacgcctgggcgataat
aaagaacgcaagatttcgtgccggataatcagtgcaaccaatcaggacttatttgcgctg
gcaaagagcggccttttccgtgaagatctgttataccgtttgactcccgttattgcggat
attccgcccttacgtgagcggttagaggacataccgctgctggcaagagaatttgtagac
cgctttaacgatgaactggcgctaaacataaaaatcatatcccaggatttgatgcagcta
tttttatattaccgctggccgggaaatgtgcgtgaattggagcatatcattgaaagcgcg
atgagcctggccgaaaatacagaaaccatattatccagggagcatctgcccaggatgtta
aaaaagagactgatgagtgatcaaacaaagtccggctcaagtgatagtgaagcaggtgcc
aataagtcgctagccgaactgttgcgtcaatacgagaaagaaaccattgaaaacgcactg
atactaaagaatgggaacgtaagccagtgcgctattcaactgggaattaccaggcaaaat
ttgcattatcacctccgccggcatggaattaaagctgttttgtataaagcccagtctgtc
ggcgatgcaacagattcccctgtgccttaa
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