Sporomusa sphaeroides: SPSPH_041060
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Entry
SPSPH_041060 CDS
T10405
Symbol
mrdA_2
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph00550
Peptidoglycan biosynthesis
ssph01100
Metabolic pathways
ssph01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SPSPH_041060 (mrdA_2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SPSPH_041060 (mrdA_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssph01011
]
SPSPH_041060 (mrdA_2)
Enzymes [BR:
ssph01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SPSPH_041060 (mrdA_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssph01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SPSPH_041060 (mrdA_2)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WXA41308
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Position
complement(4423583..4425397)
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AA seq
604 aa
AA seq
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MWIEQIRRLKIVGLVVVGIVSLLVLRLVWLQLLQGAHYKKNAEQNRTRQISVQAPRGVIY
DRNGEILVSSRPSFAVSIVPHEYTNPQEATPLLASITGVAVEEINQLLADSIDFPYTPVR
IQRNADDVMIARIQERQYYLPGVVLEAIPVRQYVYEELASHVLGFVGRISQEEYARNKEQ
GYHPADLVGKDGLEREWEEVLRGTDGSRQSEVNASGEEVRPLGNRPSVTGRGLVLTLDAN
LQKAAEEALAAQVAASRTIGEPAKGGSVVVLDVNTGGVLVMASNPPFNPNLFAGGISSKA
WNELIANPDHPLNNRAIQNAYPPGSVFKIVTAAAALEMNLTTPQEIFDDRGVYVLNGWRF
YGWNVKGLGKLNIVDGLSLSSDPVFYELGRRLGADNLAAYALTFGLGKATGIKLAGEVKG
IVPYIEWKQANYGEPWYPGETLIAAIGQGYYLATPLQQALLTMAVANGGIVYKPRLVDQV
LTPEGSLAASLPPEVLWTIYLRPEVWDTVRQGLIAVTTRGTGAAAFKDFPQTIAGKSGSA
ETGRGTTHSWFACYAPAEKPEIAMAVLVEEGGDASVAAVPVTRRVLEAYFGIPNKQLPPA
PTTD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtggattgagcaaatccgccgtcttaagatagtgggccttgttgttgttggcattgtt
agcctattggtgctccggctggtatggctgcaactgctccagggagctcattacaaaaaa
aatgccgaacagaaccgtacccggcaaatcagcgtccaggcgccgcgtggtgtcatatat
gacaggaatggcgaaattcttgtaagcagcagaccaagttttgccgtttccattgttcct
catgaatataccaatccgcaggaagctacgccgctgctcgcatccattaccggtgtggcg
gttgaggagattaatcaattattggcagacagtattgactttccgtatacaccggtacgg
atacaacgcaatgccgatgatgtcatgattgccaggatacaggagcgccagtattatctg
cccggagtagtccttgaagccatacctgtcaggcagtatgtctatgaagaactggcttcc
catgtgctggggtttgtcggcagaattagccaggaggaatatgccaggaacaaagaacag
ggataccaccctgccgacttagttggcaaggacggtttggagcgggaatgggaggaagtg
ctgcgcggtacggacggtagccggcagtcagaagttaacgccagcggcgaagaagtccgc
cctctggggaaccggccgtctgttaccggccggggactggtattaacccttgatgcgaat
ctgcaaaaagcggcagaagaagcgctggccgctcaggtggcagccagccgtacgatcggt
gaacctgccaagggtggcagtgtggttgtgcttgatgtcaacaccggcggtgtattggta
atggccagcaatccgccctttaatcccaatctgtttgcgggaggcattagcagtaaagcc
tggaatgagctgattgccaatcctgatcatccgttaaacaaccgggctatccaaaacgcc
tatccgcctggttcggtatttaaaattgttaccgccgccgcggcgctggagatgaacctt
accacgccgcaggagatatttgacgatagaggtgtttatgtactaaatggctggcgcttt
tacggctggaatgttaaaggccttggtaagttaaacatagttgacggtttgtccttatcg
agcgacccggtattttacgaactggggcgccgtctgggggcggataacctggcagcatat
gctttaacctttggcttgggcaaagccaccggaattaagctggcaggggaagtgaaggga
atagtaccttatattgagtggaaacaggccaattatggtgagccctggtatccgggagaa
acgttgattgccgccattggtcagggctattatctggcaacaccgttgcagcaggcgctc
ttgactatggctgtagccaacggtggtattgtctataagccaaggcttgttgaccaagtg
ctgacaccggagggcagtcttgccgcaagtttgccgcctgaggttttatggacaatctat
ctgcggcctgaagtgtgggacactgtgcggcaaggattgattgcagttaccacccgtggc
accggtgccgccgcattcaaagactttccgcaaacaatagccggaaaatccggttcggca
gaaaccggcagaggtactacccattcctggtttgcttgttatgctccggccgaaaagccg
gaaattgccatggctgttctcgtggaagaaggcggtgatgcttctgtggccgccgtaccg
gttacccgccgggtattggaagcttatttcggcataccgaacaagcaactgccgcctgcg
ccaacaaccgattga
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