Sporomusa sphaeroides: SPSPH_042150
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Entry
SPSPH_042150 CDS
T10405
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPSPH_042150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssph03400
]
SPSPH_042150
Enzymes [BR:
ssph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SPSPH_042150
DNA repair and recombination proteins [BR:
ssph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPSPH_042150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WXA41414
LinkDB
All DBs
Position
4543135..4543803
Genome browser
AA seq
222 aa
AA seq
DB search
MTYSTHEQLEQSLLTCAACPLRQSAIGPTSYNGSPLSPLAIVGEGPGGVEDEYGVPLVGP
SGQLLDKALASVAITRDRIYTTNVIKCRPKNNRTPTIEEGEFCATAWLDQELTFVQPKVI
IALGSVALKYLLSPTARITKDRGQWFTTKYGIPAIATYHPAYLLRLVGKDLVKAKWEVYY
DLKAAVEKCQELAPEYIFKSAEPPDLLALYSQRREQRQAAKR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgacatactctacccatgaacaactggaacaatcgctcctaacctgcgccgcctgcccg
cttcgtcagagcgccattggcccgacatcctataacggctcgccgctaagcccgttggca
attgtcggtgaaggacccggcggcgtcgaggatgaatatggcgtgcctttggtcggtccg
tcaggtcagctgctggacaaagcgctggccagtgtcgccattaccagagaccgcatatac
actacaaatgtaattaaatgccgtccgaagaataaccgtacccccaccatagaggaaggg
gaattttgtgccacagcctggctggaccaggaactgacctttgttcagccaaaggttatt
attgctttaggcagtgtggcgttaaagtatctgctctcgccaacggcccggatcaccaaa
gaccgcggtcagtggtttactaccaaatacggtattccggccattgccacctaccatccg
gcctatctgctccgccttgtcggcaaggacctggtaaaagctaaatgggaagtgtattac
gatctgaaagcagccgtagaaaaatgtcaggagctggcgcctgaatatattttcaagtcc
gctgagccgccagatttactggcactctacagccagcggcgcgaacagcgccaagccgcc
aaacggtaa
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