Sporomusa sphaeroides: SPSPH_042760
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Entry
SPSPH_042760 CDS
T10405
Symbol
ruvB_2
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ssph Sporomusa sphaeroides
Pathway
ssph03030
DNA replication
ssph03430
Mismatch repair
ssph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPSPH_042760 (ruvB_2)
03430 Mismatch repair
SPSPH_042760 (ruvB_2)
03440 Homologous recombination
SPSPH_042760 (ruvB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssph03032
]
SPSPH_042760 (ruvB_2)
03400 DNA repair and recombination proteins [BR:
ssph03400
]
SPSPH_042760 (ruvB_2)
Enzymes [BR:
ssph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPSPH_042760 (ruvB_2)
DNA replication proteins [BR:
ssph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPSPH_042760 (ruvB_2)
DNA repair and recombination proteins [BR:
ssph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPSPH_042760 (ruvB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_30
TIP49
RuvB_N
AAA_22
AAA_5
AAA_19
AAA_7
AAA_2
Rad17
DnaX_C
AAA_14
DUF815
Mg_chelatase
AAA_18
AAA_16
AAA_24
DnaA_N-like_STI
AAA_assoc_2
nSTAND3
AAA_28
AAA_6
RNA_helicase
PIF1
Motif
Other DBs
NCBI-ProteinID:
WXA41475
LinkDB
All DBs
Position
complement(4608405..4610138)
Genome browser
AA seq
577 aa
AA seq
DB search
MAYVALYRKWRPQDFDSLVGQEHISTTLKNAIATGKIAHAYLFSGPRGTGKTSTAKILAK
SLNCEHGPSVNPCNHCSNCDKITAGTSMDVFEVDAASNRGIDEIRDLRETVKFAPVDGRY
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFVLATTEPHKIPATIHSRCQRYDFRRINA
REIEERLSMVAEQSGLKAAPDALRLIAIQAEGGMRDALSILDQCAALDDGSVITAAHVRQ
LLGLIGHEWVWQLTDAVAERDAHSVLVKLDELINLGKDIRQLLVELALHARSLMLYKAAP
AIDTIEVYSDDKAVLAAQSAKFSHQELVAVLEVLHHAANEAKWAAEPRIVVEMALITLCR
RAAKSDMAALLERVAALEARLAGNPAGAAVSMAKTEAPAAEPPPSVPRVQSPVTPMPPRP
QPEPQTPLSPPAPPPANPSVSAPPEPSGGSVGGDLNEIWSAVLKELMTSGKRSVHACVMQ
GRLTGLTATQATVHFTATFPKERTEKDDYRTIVEKILAHITGHQVKLMCSLGTDTPPAKP
AAPKPAVAAAPPDPGMEHPAVKQAQMMFGGKVIKIEE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtggcttatgtggctttataccgcaaatggcggccgcaggattttgattccttagtcggt
caggagcatattagtactaccttgaagaatgccattgccaccggcaagattgctcatgcc
tatctgttttccggtccgcgtggtacaggaaaaaccagtacggccaaaattctggcaaaa
tcactcaattgtgaacatggtcccagcgtcaatccctgcaaccactgttccaactgtgat
aaaattactgccggtacttccatggacgtatttgaagtggacgcagcttccaaccggggc
attgacgagattcgcgatttgagggaaaccgttaagtttgcgccggtagacgggcgttat
aaggtgtatattatcgacgaagtgcatatgctgacaacagaggcttttaacgccctctta
aaaaccctggaggaaccgccggcccatgtggtatttgtgctggcaaccaccgaaccgcat
aagattccggccaccatccattcgcgctgccagcgttatgacttccggcggattaacgcc
agggaaattgaggagcggctgagtatggtggcagaacagagcggcctcaaggctgctccg
gatgcactcaggcttattgccattcaagccgagggcggtatgcgggatgcgctcagtatt
ttggaccaatgcgctgctttggatgacggcagcgtgataacagccgcccatgtgcgccag
ctattaggcttgattggtcatgagtgggtgtggcagttaaccgacgctgtggctgaacgg
gatgcgcacagcgtactggtgaaacttgacgaacttattaatctagggaaagatattcgc
caactgcttgtggagctggcgctgcatgcccggagtctgatgctgtataaagctgctcct
gctatagatactattgaagtatacagtgatgataaagctgtgcttgccgcccagagtgcc
aagttcagccatcaggaactggtagccgtgctggaagtgctgcatcatgccgctaatgaa
gcaaaatgggcggctgagccgcgtattgtggtggaaatggcgctgattacgttgtgccgc
agggcggcaaagagcgatatggccgcactcttagagcgggttgctgcgcttgaagccaga
cttgccggcaatccggcaggggctgccgtcagtatggctaaaacggaggctcccgcagcg
gaaccgccgccgtcagtgccgcgggtgcagtcacctgtaacacccatgccgccgcggccg
cagccagaaccgcaaacgccgctcagtcctccggcaccaccgccagccaatccgtctgtt
tcggctccgccggaaccgtcaggcggcagcgttggcggcgatctgaatgagatatggtcg
gctgtgctcaaagaactcatgaccagcggcaagcggtcggtacatgcttgtgtgatgcaa
ggacgcttgacagggcttaccgctactcaggccacagtgcactttacggcaacctttccc
aaggaacgcaccgagaaggacgattaccggactattgtggaaaaaatcctggctcacatt
accggacatcaggtaaaattaatgtgctcactggggacagatacgccgccggccaaaccg
gctgcgccgaagccggcggtggcagccgctccccctgatccagggatggagcatcctgcg
gttaagcaggcccagatgatgtttggtggcaaagtaattaagatagaggaataa
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