Sphingobacterium spiritivorum: I6J01_00435
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Entry
I6J01_00435 CDS
T07566
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
sspi
Sphingobacterium spiritivorum
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspi03000
]
I6J01_00435
Transcription factors [BR:
sspi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
I6J01_00435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
DUF1971
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
QQT35926
LinkDB
All DBs
Position
complement(96246..97202)
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AA seq
318 aa
AA seq
DB search
MEVIQKNKKSEGKNFATVPQSKNNSLDVCEVCGSVRHVVFQNFLSIVPLEMIKSCQRDTP
FHSTRKGFYSMILITKGRATETIAYQTYTFEGGTLYFIPENTLHKIQHWSEDIEGYHCSF
DSEYFLLCLKNQIKLMEYPFFIPDNDPFVCLKENEMAQLVPLFDKLKHEYTNRQNYNDDL
LTRLYLNALLLEVGRMYIQQSAETITHSRQEQLVSKFKRLVHAHFLTYRQVSDYADLLFV
HPHYLNDMVRAITGQSASNFIYQHLLAEAKSHLVQSDDTIAQIAARLRFSDQSYFGRFFR
KHAGMTPAQFRQQHTQAI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaatacaaaaaaataaaaaatctgagggaaaaaacttcgctacagtaccgcag
tcgaaaaataatagtttggatgtatgcgaagtttgcggatctgtcagacatgtagtcttt
caaaattttctttccattgtaccgctggaaatgatcaaatcctgtcagcgcgatacgcca
ttccacagtacaagaaaaggtttttacagcatgatcttaattacaaaaggcagagctaca
gaaactatcgcatatcagacctatacttttgaaggagggaccttatattttatccccgaa
aataccttacataaaatacagcactggtctgaggatattgaagggtatcattgtagtttt
gattcggaatactttttattgtgtctgaaaaaccagatcaaactgatggaatatcccttt
tttattcccgataatgatccttttgtctgtcttaaagagaatgaaatggcgcaacttgta
cctctttttgataagctaaaacatgagtacacaaaccgacaaaattacaacgatgatctg
cttacgaggctttatctcaatgcgctcttgctggaggtcggacgtatgtatattcagcaa
tctgctgaaacaatcacgcattcgaggcaggagcagctggtaagtaaattcaaacggctt
gtgcatgctcattttctgacttacagacaggtatccgattatgcagatctgctttttgtt
catccacattatctcaatgatatggtgagagcgattaccgggcagtccgcaagtaatttt
atctatcagcatttgctggccgaagccaaatcgcatctggtacaatccgatgatactatc
gcacagatcgctgcccgtctccggttttcagatcagtcttatttcggtcgttttttcaga
aagcatgccggaatgacacctgcacagtttcggcaacagcatacacaggcaatctaa
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