Sphingobacterium spiritivorum: I6J01_00630
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Entry
I6J01_00630 CDS
T07566
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi02020
Two-component system
sspi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6J01_00630 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I6J01_00630 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspi03021
]
I6J01_00630 (rpoN)
Transcription machinery [BR:
sspi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J01_00630 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF4158
MarR
LacI
Motif
Other DBs
NCBI-ProteinID:
QQT35961
LinkDB
All DBs
Position
154469..155932
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AA seq
487 aa
AA seq
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MLKQTLQQKLLQKLSPQQIQFIKLLQVPTVSLDARIKEELEENPALEDGSLINMNEPVQE
YPDKDPDEQYEGEDNSFDEEFSVDEYIQDDDFNDYGNSYGGDDEEDRKEMPIAIQSSFFE
SLQNQLDLLALDDKNFLIGQQIIGSLDDDGYLRRPILSLIDDLAFSQNVIAEEEEVLEML
KIVQDFEPAGIGARDLQECLLIQLKKKNNDNEAVKKAIIVVQNYLEEFTKKHYDKLEKAL
GLNSEELKNIIQEILKLNPKPGDSGAAAGKQLHIIPDFHISNNDGVLHLTLNGRNAPELR
VSRSYQEMFEHYEKVEKTDKKMKEAVQFVKQKLDSAKWFIDAIKQRQQTLLKTMNAIMEY
QYEYFLTGDDRMLKPMILKDIADRIEMDISTVSRVANSKYVQTEFGTFLLKSFFSEAIQT
DSGEEVSNKEVKKILEECISNEDKRKPLADEKLTDILKEKGYSIARRTVAKYREALNIPV
ARLRKEL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcaaactttacaacagaaacttttacaaaaactttcgccacagcagattcag
tttatcaagctgttgcaggtacctactgtttcattagatgcccgtatcaaagaggaactt
gaagaaaacccggcattagaagacgggagtttgatcaatatgaacgaacctgtacaggaa
tatccggataaagacccggatgagcagtacgaaggtgaagacaattcattcgatgaagaa
ttcagtgtagatgaatatattcaggatgatgactttaatgattatggcaattcttacgga
ggagatgatgaggaggatcgcaaagagatgcctatagctattcaaagttcattctttgag
agtcttcagaaccaactggacttactggctttagatgacaagaactttttgatcggtcag
cagattatcggcagtcttgacgatgacggatatctccgcagacctatcctgtcgcttatt
gatgaccttgccttttcgcagaatgtaattgctgaagaagaggaagtactggagatgctc
aaaatcgtacaggattttgaacccgccggcattggtgcgagagatcttcaggaatgcctt
cttatacaactaaaaaagaaaaataacgataatgaagccgtgaaaaaggctattattgtg
gtacagaattacctggaagagtttacaaagaaacactatgataagcttgaaaaagcattg
ggacttaattcagaagaactcaaaaatatcattcaggagatcctgaaattaaatcctaaa
ccgggagattcaggagcagcagcaggaaagcaacttcacattatccccgacttccatatc
agcaacaatgacggtgttttgcacctgaccttaaacggccggaatgcgccggaattaagg
gtttccagatcttatcaggagatgtttgaacattacgaaaaagtggagaagacagataag
aaaatgaaggaagcagtacaatttgtcaaacaaaaactagattcggctaaatggtttatc
gatgccattaaacagcgtcagcagactttgttaaaaacaatgaatgcgattatggaatat
cagtatgaatatttcctgacgggagatgaccgcatgcttaaacctatgatacttaaagac
atagcagatcgcatagaaatggatatttcaacagtttcgcgtgtagccaattccaaatat
gtacagactgaattcggcacatttttacttaaatcatttttctctgaagccatacaaacc
gattcgggtgaagaggtttctaataaagaggttaagaaaattctggaagaatgtatctcg
aatgaagataagcgtaaacctttagcagatgagaaactgaccgatatcttaaaagaaaaa
ggttattctattgcccgccgtacggtagcaaagtaccgggaagcattaaatataccagtc
gcaagattaagaaaggaactgtaa
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