Sphingobacterium spiritivorum: I6J01_01490
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Entry
I6J01_01490 CDS
T07566
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sspi
Sphingobacterium spiritivorum
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_01490
DNA repair and recombination proteins [BR:
sspi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6J01_01490
Archaeal homologous recombinant proteins
I6J01_01490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_21
PRK
DUF7219
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QQT36129
LinkDB
All DBs
Position
408016..411054
Genome browser
AA seq
1012 aa
AA seq
DB search
MLPIYLSIEGLYSYQEKQEIDFTKLTEAGLFGIFGNVGSGKSSILEAISFALYGNTERLN
SKENRSYNMLNLKSAAATIIFDFINFENRRFRFAVHWKRKKKFDQTSTIERVAYEWLQHN
WVPMESADATHITNLTYQNFKRTIIIPQGQFKEFLDLKGKDRSDMMKEIFNLDKYDLGPK
VSLLQIENNRKIEHLQGALSGFEEINSGTIELKKNGLSEAKVLLDQLRSAYQQTENSYKV
LSEAKANRENLKEKEEQFAQLKLKQPEILHLEKEMDEYEKLVSLFREPLDRIQSLQRDQD
QLEIKIQNLLQEKQQTSLTLKEKELSFQKVEKDFRKIEELRIKISDLKNLIQIRTQQSEK
SNLQSRLAKGTPILEQTRKEEQAFIADINLQETTLEQLKSVRIDTSELMEIDNWYQRHDL
LLKNKSALIEKVDLLKLQQEELTNSFTVNGYTVDNWESEITNQLRQITTDIKALTNQETD
LQVQKELGRFADNLHHEEACPLCGSLDHPHPMQIHDVSIQLGELKAKQTEITERQQQLQS
LLSQMTRWSTSYQDKKIQLEAAAKELQQADEQLTELRTRFSWENFRWDDRTLFDEQKTAL
RQSEIQIKEAELLLKSLRVQLAETQSKAAKFERSLNEFTQQIAVIDGLITQHKMQIQAIQ
IEDYNHNSDQDLLAEIQNAEELIIRTEEQHKTLQAAINQLHTIVASVQGKHTEALENYQN
TVQKIDKLNQEILAHIEQQHLPGVRAIQLVLQKNLPVIENRKRIHDYKVAYETLQKQITE
LMQSSAVQDFDEALFERTKIELEEKKSAHELQIAHTGALERELQRLEDEFEKKGKLLTAF
EKLSHRKDNLRTLDNMFKGSGFVNYVSSIHLQRLCDIANQRFHRLTKNQLSLIINEANEF
EVIDYLNNGYHRSVKTLSGGQGFQASLCLALALAENIQSLNKADKNFFFIDEGFGTQDAE
SMNTVFETLQYLNKENRIVGIISHVEELKERIPMSVTVIKDLERGSIVKMSS
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgctacccatatatttaagtatagaaggcttatattcttatcaggaaaaacaagaaata
gatttcaccaaacttactgaagcgggattattcggtatattcggaaatgtcggctccgga
aaatcctctattctcgaagcgattagttttgccttgtatggtaacaccgaacgtctcaat
tccaaagagaacagaagctataatatgctcaatctcaaatctgctgcagccactatcatc
tttgattttatcaattttgaaaaccgcaggttcaggtttgcagtacactggaaaagaaaa
aagaaatttgatcagacctccacaatagaacgggtggcttatgaatggttgcagcataat
tgggttccgatggaatctgcagatgccacacatatcactaacctgacctaccaaaatttt
aaaagaactatcatcattcctcagggacagtttaaagaatttcttgacctcaaaggtaaa
gaccgttcggatatgatgaaggaaatcttcaacctggataaatacgacctgggaccaaaa
gtatccctgcttcaaatcgaaaacaacagaaagatcgaacatctgcagggggcattgtcc
ggatttgaagaaataaactcaggaacaattgaactgaagaaaaatggtttaagcgaagct
aaagtattgctggaccaattaagatcagcatatcaacaaaccgaaaacagctataaagtg
ctgtctgaagcgaaagcaaatcgtgaaaacctgaaggaaaaggaagaacaatttgcacag
ttaaaactaaaacaacccgaaatcctacatctggaaaaagaaatggatgaatacgagaaa
ctggtatccctgtttcgtgaacctctggacagaatccaatctttacaacgggatcaggat
cagctggaaataaaaatccagaatctgttacaggagaaacaacaaacttcactgacactg
aaagaaaaagagctatcttttcagaaggttgaaaaagatttccggaaaatagaagagctc
agaataaaaatcagtgatcttaaaaatctgattcagatacgaacccaacagtctgaaaag
agtaatctgcaaagccgtttggccaaaggaacacccatactggaacagactcgcaaagaa
gaacaagcctttatagcggatataaatcttcaggaaacaacccttgaacagttaaaatct
gtcagaatcgacacttccgaactgatggaaatagacaactggtaccagcgtcatgatctg
ctcctgaaaaacaaatctgctttgatcgaaaaggttgatctgctgaaattgcagcaggaa
gaattaacaaattcatttacagttaacgggtatacagtagacaactgggaatctgaaatc
accaatcagctccggcagattactaccgatatcaaagcattaactaatcaagagactgat
ttacaggtacaaaaagaactcggccggtttgcagacaaccttcatcatgaagaagcctgc
cctctttgcggatctttggatcatccgcatcctatgcagatacacgatgtcagcatacag
ctaggggaattaaaagcaaaacaaacggagataacagaaagacagcagcaactgcaatca
cttctcagtcagatgaccagatggagtacatcctatcaggacaaaaaaatacaactggaa
gcagcggcaaaagaattgcaacaggcagatgagcaactcacagaactacgtacccgattc
agctgggaaaatttccgttgggacgatcgtacgttatttgacgaacaaaaaacagcttta
agacaaagtgaaatacagataaaagaagcagagctcctgctaaaatcattgcgtgtacag
ctggcagagacacagagtaaagcagcaaaattcgagcgctcattaaatgagttcactcaa
cagattgccgttatagatggcctgatcacccagcataagatgcagatacaagctattcag
attgaagattacaaccacaatagcgatcaggatctcttagcagaaatacaaaatgccgaa
gagctgataattcgcacagaagaacaacataaaaccctgcaggctgcaatcaatcaactc
cacacgatagtcgcatctgtacaaggaaaacatacagaagcactggagaactaccagaat
acagtacaaaagattgacaagctgaatcaggaaatacttgcccacatcgagcagcagcat
ttaccgggtgtcagagccattcagcttgtattgcaaaaaaatctgcccgtcatagaaaac
agaaaacgtatacacgactataaagttgcttatgaaacacttcaaaaacaaattactgaa
cttatgcaaagcagtgccgttcaggattttgatgaagcacttttcgaacgtaccaaaatc
gaattagaagaaaagaaatcagcacatgagttgcagatcgcacatacaggagcattagaa
cgtgaattgcaacgtttggaagatgagtttgagaaaaagggaaaactgctgacagcattt
gagaagctgagccatcgcaaagataatctgcgtacgcttgacaacatgtttaaaggctca
ggatttgtcaattacgtatcgagtatacatttacaacgcttatgtgatattgcaaatcag
cgttttcacaggctgacgaaaaatcagctcagcctgattatcaatgaagccaacgaattc
gaggtcatcgactacctcaacaatggctatcaccgttctgtaaaaacactttcaggaggg
cagggatttcaggcctccctttgcctggcattagcattagccgaaaatatacagtcgctc
aataaggctgataaaaatttcttttttatagatgaaggtttcggcacacaggatgcagaa
agtatgaataccgtattcgaaacattacaatatctcaataaggaaaacagaatagtaggt
atcatttcgcatgtggaagaattgaaagaacgtattcccatgtccgtaacagttatcaaa
gatttggaaagaggaagtatagttaaaatgagttcctga
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