Sphingobacterium spiritivorum: I6J01_01970
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Entry
I6J01_01970 CDS
T07566
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi03420
Nucleotide excision repair
sspi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6J01_01970
03430 Mismatch repair
I6J01_01970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_01970
Enzymes [BR:
sspi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6J01_01970
DNA repair and recombination proteins [BR:
sspi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J01_01970
MMR (mismatch excision repair)
Other MMR factors
I6J01_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
AAA_12
DEAD
Sec66
AAA_22
Inhibitor_I29
Motif
Other DBs
NCBI-ProteinID:
QQT36219
LinkDB
All DBs
Position
complement(517434..519710)
Genome browser
AA seq
758 aa
AA seq
DB search
MDYLAGLNPTQRAAVEQTEGPVMIVAGAGSGKTRVITYRVAHLIRKGVDPFNILVLTFTN
KAAKEMRERIMKVVGGEAKNIWMGTFHSVFARILRVEAELIGYPRNFTIYDTDDTKSLLR
SILKEMNLDDKLYNVNHVYGRISQAKNNLISPQEYNKNEAIKAEDHSNGRGQMGQIYMTY
AQRCYRAGAMDFDDLLFKTNVLLNKHPDVLHKYQHQFKYLMVDEYQDTNFSQYLIVKRLA
AVNENICVVGDDAQSIYAFRGANIQNILNFQKDYPDVKVFKLEQNYRSTKMIVNAANSII
ANNKNQLEKNVFSDNEDGEKIKVNRAFSDNEEGKIVADIIAQEKALKGLNFKDFAILYRT
NAQSRSMEEALRKINIPYKIYGGTSFYQRKEIKDLIAYFRLTFNPNDEEALKRVINYPRR
GIGDTTIERIMIAADQQQIRLWDVVANAQMFLDGRSAGSVSGFATMVQSFQAMANNHSAF
DTAMHIAQHSGVLKDLYEDKSVEGLSRYENIQELLNGIKEFSEREDIEDRGLDVFMQDIA
LLTNDDNDKNPNADTVSLMTIHSSKGLEFPIVFIVGLEENLFPSQLSLNSRSELEEERRL
FYVAVTRAEKKLHLSYATSRYRWGSLNNCEPSRFLDELNPACLDLDFKPRGMPSSAGDGF
QRERMTWQQKDQDAFSKPKPKVVKTTSILPKAHTPTEGFAPSDTSGLQVGMEVEHERFGF
GKVINLEGSKPDLKATIFFKELGQKQLLLKFAKLRIVQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
ttggattatctagcaggattaaatccgacccaacgtgcggctgttgaacagacagaagga
ccagtaatgattgtcgccggagccggatcgggtaaaacacgtgtgatcacctatcgtgtg
gcacaccttatacgtaaaggtgtggatccctttaatatattagtgttgacttttaccaat
aaggctgcaaaagagatgcgggagcgtatcatgaaggtcgtaggaggagaagctaagaat
atctggatgggtacttttcactcggtttttgcccggatattacgtgtggaagccgaattg
attggttatccgcgcaattttacgatctacgatacagacgataccaaaagtttgctccgt
tctatcctcaaggagatgaatctggatgataagctgtataatgtcaaccacgtatatggt
cgtatttcacaggcgaaaaataacttgatttctccgcaggaatataataagaatgaagct
atcaaagcggaagatcattcaaatggcaggggacagatgggacagatctatatgacctat
gcacagcgctgttatcgtgccggagcgatggactttgacgatttgttattcaagaccaat
gtgcttctgaataagcatccggatgtcttacacaagtatcagcaccagtttaaatatctg
atggtggatgagtatcaggatactaacttttcccagtatctgattgtcaagcgtctggct
gcggtgaacgaaaatatttgtgttgtaggggatgatgcacagagtatctatgcctttcgc
ggtgcgaatatccaaaatatcctgaatttccagaaagattatccggatgtaaaggtgttc
aaacttgagcaaaactaccgttcgaccaagatgatcgtgaatgccgccaacagtattatt
gcgaacaacaagaatcaactggagaagaacgtattttcggacaatgaggatggtgaaaag
ataaaggttaacagagccttctccgataatgaagaaggaaagattgtagccgatattatt
gctcaggaaaaagcccttaagggattaaactttaaagattttgcgattctgtatcgcacg
aatgcacagtcccgatcgatggaggaggcgcttcgtaagatcaatattccttataagata
tacgggggaacctctttttatcaacgtaaggagataaaggatctgattgcttacttcaga
ttgacgttcaatccgaatgatgaggaagcgctgaagcgcgttattaactatccgcgtcgt
ggaatcggggatacaactatcgaacgcattatgatcgccgctgatcagcagcagatcagg
ttgtgggatgttgtcgccaatgcgcaaatgtttctggatggaagaagtgccggctcggtg
agtggttttgctacgatggtgcagagttttcaggcgatggccaataaccattcggcattt
gatacagcgatgcacattgctcaacattcaggagtactgaaggatctgtatgaagataaa
tcagtagaaggactcagcagatacgaaaatattcaggagctcttaaatggtatcaaggag
ttttcggagagagaggatatagaagatcgtgggctggatgtgtttatgcaggatattgct
cttctcaccaacgacgataacgataagaatccgaacgcggataccgtatccctgatgacg
attcactcttcaaaaggattggaatttccgattgtctttatagtcggactggaagaaaat
ctgtttccttcacagctgtctctaaactccaggtctgaactggaagaggaaagacgatta
ttctacgtagcagtaacgcgtgcggagaaaaagctgcatttatcatacgcaacctcccga
tacagatgggggtcattgaataattgtgaaccaagcaggtttctggacgaattgaatccg
gcctgtcttgatcttgactttaaaccaagaggtatgccttcatcagcaggcgatggtttt
cagagagagcgcatgacctggcagcagaaagatcaggatgccttctccaaaccaaaacca
aaagtagtgaagacgacttctatattaccgaaagcgcatacacctacggaaggctttgct
ccgtctgataccagcggacttcaggtagggatggaagtagaacatgaaagatttggattt
ggtaaggttatcaatctggaaggcagtaaaccggaccttaaagcaactattttctttaaa
gagttgggacaaaagcaattgttgcttaaatttgccaaacttaggattgtacaatag
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integrated database retrieval system
