Sphingobacterium spiritivorum: I6J01_05280
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Entry
I6J01_05280 CDS
T07566
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi00540
Lipopolysaccharide biosynthesis
sspi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
I6J01_05280
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sspi01005
]
I6J01_05280
Lipopolysaccharide biosynthesis proteins [BR:
sspi01005
]
Lipid A
I6J01_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
QQT36841
LinkDB
All DBs
Position
complement(1236479..1237426)
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AA seq
315 aa
AA seq
DB search
MLFKINRFICRFSIGFVVFTMFLSSAFSQERLPHLLEFQSDNDVYLMNGQDRYYTNGLIV
TYSVPLQQKSDRRTDILSFQLGHQLYNGIEVQAGNSLYWDRPSTAYLFLNGEFQRVYGDE
WVWTAKAEVNVIGKGAKGKEVQKYVHRLLSMYEVESWASELNTSVGADVESKLSKKIWRS
TSNKLELSGGGTLRAGMAFSHASAQVTLRFGKLADYYTSHFTKTGGFLNTDNEYYLFYTP
SYTYQLYNATIQGGPFSRDKQKFYEIEPYIMKHYIGGAWSNRKIYVDAGFVFNTKEGKKM
YSNHQYGTIRLGLRF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgctttttaagattaatagatttatttgtcgcttttctatcgggtttgttgtgttcacc
atgtttctgtcatctgcattttcgcaggaacgtcttccacatttgttggaatttcagagt
gataatgatgtgtatctgatgaatggacaggatcggtattataccaatggattgattgtt
acttactccgttccgttacaacagaaaagtgaccgaaggacggatatcctttcctttcag
ctgggacatcagttatacaacggcattgaagtgcaggccggcaattctttatattgggac
agaccttctacagcctatttatttctgaacggggagtttcagcgtgtttacggagatgaa
tgggtgtggacggcgaaagcagaagtaaatgttataggcaaaggtgccaagggcaaggag
gttcagaagtatgtccaccggttgctgtccatgtatgaggtggaaagctgggcatctgaa
ctgaatacttctgtaggggcggatgtggagagtaagctgtctaaaaaaatatggagaagt
acttcaaataagcttgagctgtcaggaggcggtacattacgtgccgggatggcattttca
catgcctccgctcaggtcaccttacgctttggaaagctggcggactattatacctcgcat
tttacaaaaactggcggatttttaaatacggataatgagtattaccttttctatacacca
tcttatacctatcagctttataatgcaactattcagggaggtcctttttcccgggataag
caaaaattttatgagattgaaccttatattatgaaacactatattggaggtgcatggtct
aatagaaagatctatgtagatgcgggatttgtatttaatacaaaagaaggaaagaagatg
tattctaaccatcagtacgggacgatacgcttaggtctccggttttga
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