Sphingobacterium spiritivorum: I6J01_07530
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Entry
I6J01_07530 CDS
T07566
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi03030
DNA replication
sspi03410
Base excision repair
sspi03420
Nucleotide excision repair
sspi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J01_07530 (polA)
03410 Base excision repair
I6J01_07530 (polA)
03420 Nucleotide excision repair
I6J01_07530 (polA)
03440 Homologous recombination
I6J01_07530 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspi03032
]
I6J01_07530 (polA)
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_07530 (polA)
Enzymes [BR:
sspi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J01_07530 (polA)
DNA replication proteins [BR:
sspi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I6J01_07530 (polA)
DNA repair and recombination proteins [BR:
sspi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I6J01_07530 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6J01_07530 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DUF3913
Motif
Other DBs
NCBI-ProteinID:
QQT37254
LinkDB
All DBs
Position
1817579..1820371
Genome browser
AA seq
930 aa
AA seq
DB search
MKKLFLLDGMALIYRAYFALSKTPRLTSNGLNTGAIMGFTNTLLEVLKNQKPTHIAVVFD
IDAPTNRHIEFESYKAHREKMPEDLSASIPYIFRLIEGFNIPIITKDGYEADDIIGTLAK
EGEQKGFTVYCMTPDKDFGQLVSDNIFIYKPARMGNGAETQGVPEILAKWEISDVSQVID
ILGLWGDAVDNIPGIPGIGEKTAKKLVQDFGSVEGIIANSDKLKGKMKENVETFAEQGLL
SKRLATIQLDVPIEFDEKSLLLEDPNKEVLEPLFAELEFRTLGKRVFGEDFSVADTTGKN
SSGQMDLFSTTVNDLTPQQEEIPPVASNNIDNTAHEYILVDSSEAQQKLAKELAGQKSFC
FDTETTGLDALVADIVGLSFAFEKGKAYYVPTPDSREQALEIVNIFKPVLEDANIEKVGQ
NIKYDILLLSRYDVKVKGTLFDTMLAHYLIDPDTRHGMDVLAENYLGYIPVSITKLIGEK
GKKQGNMRDVEIELIKEYASEDADITLQLKEKFEPLLEETATLKLAQEVEFPLVYVLSEI
EKNGVKIDVDVLSVFSKTIEEDVRNLEASIYEKAGVKFNIASPKQLGEVLFDKLQLDPKA
KKTKTGQYKTGEDVLLTLANKSDIVQDILDFRQLQKLKSTYVDALPGLINPTTGLIHTSY
NQAVAATGRLSSTNPNLQNIPIRTERGREVRKAFIPRSENNVILSADYSQIELRLMAELS
QDANMLEAFQKGYDIHRATAAKVYGLELDEVSSDQRRNAKAVNFGIIYGQSAFGLSQSLG
IPRREAADIIDQYFQQYSGIRDYMAKAIASAKENGFVETILKRRRYLRDINSANMTVRGF
AERNAINAPIQGSAADMIKVAMLRIQEDIEQQQLSGKMIMQVHDELVFDVPLDEVEKFKT
LIQNRMKTAIPLQVPIEVEIGQGKNWLEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaactatttcttctagatggaatggcgctcatttacagagcctattttgcatta
agcaaaacaccgagactcacatcaaatggcctgaataccggcgcaataatgggatttaca
aacaccttactggaagttttgaaaaatcaaaagcccactcatattgcagtcgtatttgat
attgatgcacctacaaacagacacatagagtttgagtcatacaaagcgcatcgggaaaaa
atgcctgaagacctgtctgcctctattccatatatcttccgattgatagaaggattcaat
atccccatcattacaaaagatggttatgaagcagatgatatcatcggaactttagccaaa
gaaggagagcaaaaaggatttacggtatattgtatgacacccgacaaagactttggtcag
ctggtctctgataatatctttatctataaaccagcccgaatgggaaatggtgcagaaaca
caaggagtgcccgaaatactggcgaagtgggaaatttcggatgtatcacaggtcatcgat
attctcggtctatggggtgatgctgtagacaatatccccggaataccagggatcggagag
aaaacagcaaaaaaattggtacaggacttcggttcagtagaaggaattattgccaattcg
gataaactgaaaggcaaaatgaaagaaaacgtcgaaacttttgccgaacaaggtcttctt
tctaagcgtctggcaactatacaattagatgttccgatcgaatttgatgaaaaatcactg
ctccttgaagatccgaataaggaagtactggaacctctgtttgccgaactggagttcaga
acattagggaaacgtgtctttggtgaagatttttctgtcgctgatacgacgggaaaaaac
tcttccggtcagatggatctgttcagcacgacagtcaatgacttgactccgcaacaggaa
gagattcctccggtagcaagcaacaatattgataatacagcacacgaatatattctcgtg
gatagcagcgaagcacaacaaaaactggcaaaagaactggctgggcaaaaaagcttctgc
tttgataccgaaactactggccttgatgccttagtcgcagatattgtggggctatctttt
gcatttgaaaaaggcaaagcatactatgtcccgactcccgattcacgtgaacaggctttg
gagattgtaaacatatttaaacccgttctcgaagatgcaaacattgagaaagtaggtcag
aatatcaagtatgatatcttactgctgtcccgatatgacgtaaaagttaaagggacgtta
tttgacactatgctggcccattacctgatcgatccggatacccgtcacgggatggatgta
ctggcagaaaattatttgggatatatccctgtttcaattaccaaactcatcggagaaaaa
ggtaagaaacaagggaatatgcgggatgtagaaattgaacttataaaggaatacgcatct
gaagatgctgacatcaccctgcagctaaaagaaaaattcgaacccttactggaagaaaca
gctactcttaaattagcacaggaagtcgagtttccacttgtatatgttttatctgaaatt
gaaaaaaatggtgttaaaatagatgtggatgtgctttctgtgttttccaaaactatagaa
gaagatgtccgtaatctggaagccagtatttatgaaaaagccggagtcaaattcaatatt
gcttcacccaaacagttaggagaggtattatttgacaaattgcagctcgatccgaaagct
aaaaaaacaaaaaccggacaatacaaaacaggtgaggatgtattactgacactcgccaac
aaatctgacatcgttcaggatattctggacttcagacagcttcagaagttgaaatcaact
tatgtggatgcattacccggtctgatcaatccaactacaggactcatacacacgagctat
aatcaggctgtcgctgcaacaggcagattaagctcgacaaatcctaatcttcaaaatatt
ccgatccgtacagaaagaggccgtgaagtacgaaaagcatttataccaagatccgaaaat
aacgtgattctatctgccgattattcccagatcgaattaagactaatggctgagttgagt
caggatgcaaatatgctcgaagcgtttcaaaaaggttatgatattcaccgcgcaacagca
gcaaaggtatatggactggaacttgatgaagtctcttccgatcagcgaagaaatgctaaa
gccgttaattttggaatcatttatggtcaatcagcctttggcctgtcgcaaagtttaggt
ataccccgtcgcgaagccgccgatattatagatcaatattttcaacaatattccggaatc
cgggattatatggctaaagcgatagcctctgcaaaagaaaatggatttgtagaaacaata
ctcaaaagaagacgttatctgagagatatcaattcggcaaatatgaccgttcgtggtttt
gcagaacgaaatgccattaacgcacctatacagggctccgctgctgatatgataaaagta
gcaatgttacgcattcaggaagatattgaacaacaacaactgtccggtaaaatgatcatg
caggtacatgatgagttggtatttgatgttccgttggatgaagtggaaaaattcaagaca
ctcattcaaaacagaatgaagacagcgatccccctgcaggtacctatagaagtagagatc
ggacaaggaaaaaattggctggaagcacactaa
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