Sphingobacterium spiritivorum: I6J01_07560
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Entry
I6J01_07560 CDS
T07566
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sspi
Sphingobacterium spiritivorum
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspi02000
]
I6J01_07560
Transporters [BR:
sspi02000
]
Other transporters
Pores ion channels [TC:
1
]
I6J01_07560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
Surfac_D-trimer
DUF5406
Motif
Other DBs
NCBI-ProteinID:
QQT37260
LinkDB
All DBs
Position
1825332..1826714
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AA seq
460 aa
AA seq
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MNYSTIKKTAIAASLVAALGYAEVAQAQQPTVFGGRSQYRTWSIGVQGGITTPNVLIGGS
NAFGQKVGLFQNKVGEYYGLTVRKQFSHLFGLELEGNRGKIKTYNHDVSGPVAETANGAR
SAQVDVNWAASLNGVFQLGTIDFLRRENAVNFYAKVGLGVMASNPIQYANNDFTGAEVYN
NKGKWGEEIFGDREKVGDRDNKLGAFVPVGVGVKFKLSEVVALNLGYTMNFTDDNLLYGP
ARTDYKGKFSNVYGGLEFTLGSRDKQSLTFTNPVATMYDELKDPSLKNEVEALKQRVSTL
EGTVDQLGKDSDGDGVSDKFDKCPNTPAGTVVDGSGCPIKFPEPVVNNYTASTGQYGSIQ
FEFDSSVLKTESYSTLDRLAKELRDNNSSVTLDGYASAEGTEAYNMTLSKDRANAVKQYL
VNAGVTAAKVTANGYGEANPVASNATEEGRIQNRRVEIKK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaactattctacaattaaaaaaacagctatcgctgcttcattagtagccgctctaggt
tacgctgaagttgctcaggcgcaacaaccaacagtatttggtggaagatcacaatacaga
acttggtctatcggtgtacaaggtggtatcactactcctaacgtacttataggtggatct
aatgcattcggtcaaaaagtaggtcttttccaaaataaagttggtgagtactacggacta
actgttcgtaaacaattttctcaccttttcggtttagaattagaaggtaacagaggtaag
atcaaaacttacaaccatgatgtatctggtcctgttgctgaaactgcaaacggagcaaga
tctgcacaagttgatgtaaactgggctgctagcttaaatggtgtattccaattgggtact
atcgacttcttgagaagagaaaatgcagttaatttctacgctaaagtaggtttaggagta
atggcttcaaaccctatccagtatgctaataacgatttcactggtgctgaagtttacaat
aacaaaggtaaatggggtgaagaaatctttggtgacagagagaaagttggtgacagagat
aacaaattaggcgctttcgtaccagttggtgttggtgttaaattcaaattatctgaagtt
gttgccttgaacttaggttacacaatgaacttcactgatgataacttgttatacggtcca
gctagaactgactacaaaggtaaattctctaacgtatacggtggtttagaattcacttta
ggttcaagagacaaacaaagccttactttcactaacccagttgcaacaatgtacgatgag
ttgaaagatccttcattgaaaaacgaagttgaggctcttaaacaacgcgtatctacttta
gaaggaactgttgatcagttaggtaaagattctgacggtgacggtgtatctgataaattt
gacaaatgccctaacactcctgctggaacagtagtagatggttcaggatgtccaatcaaa
ttcccagagccagttgttaacaactacactgcttctacaggtcagtacggtagcatccaa
ttcgaattcgatagctctgtattgaaaactgaatcttactctactttagacagattagct
aaagaattgcgtgataacaattcatcagtaactttagatggttatgcatctgcagaaggt
actgaagcttacaacatgactctttctaaagaccgtgctaacgcagttaaacaatactta
gtaaacgctggtgttactgctgctaaagttacagctaacggttacggagaagctaaccca
gtagcatctaatgcaactgaagaaggtcgtatccaaaaccgtcgtgttgagatcaaaaaa
taa
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