Sphingobacterium spiritivorum: I6J01_08175
Help
Entry
I6J01_08175 CDS
T07566
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi03030
DNA replication
sspi03430
Mismatch repair
sspi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J01_08175
03430 Mismatch repair
I6J01_08175
03440 Homologous recombination
I6J01_08175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspi03032
]
I6J01_08175
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_08175
Enzymes [BR:
sspi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J01_08175
DNA replication proteins [BR:
sspi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J01_08175
DNA repair and recombination proteins [BR:
sspi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J01_08175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
zf-CXXC
NADH_4Fe-4S
NSUN5_N
Motif
Other DBs
NCBI-ProteinID:
QQT37365
LinkDB
All DBs
Position
complement(1969643..1970782)
Genome browser
AA seq
379 aa
AA seq
DB search
MQFKDIIGHQEIKDHLVRTVLENRVSHAQLFLGPEGSGSLALAHAYAQFINCEAKLADDS
CGQCNSCRKYAKIIHPDLHFSFPFFAKGKEETSVTYMEEWRAAFLKNPYLSLEYWRGQLE
ADNKQANINIAEAHDIIKKLSLKAFEAEYKILIMWLPEYLDTQGNALLKLIEEPPEKTLF
LLVSENQDRILNTIISRTQLVKIQKLPHQDITNYLVEERGIQKEQAGEIAFIADGNLQQA
LNLLSESGNHLDLLIRWLRFIVSDAGLHMISICDDELSKLGRENQKSFLLYAINMMRQII
LIKEELHDLVFLPEKELEFVNKFAPLFTVNQIEEAVSLFEKTHYCVERNANPKILFLDLS
LQLVLLFKYQTFPKGTQYI
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttaaagatattattggtcatcaggaaattaaagatcatctcgtacgtaccgta
ttggagaacagggtaagtcatgcccagttgtttcttggtcctgagggttcaggaagcctg
gctttagcacatgcctatgcccaatttatcaattgtgaagccaaacttgctgacgacagt
tgcggccagtgtaattcctgccggaaatatgccaaaataattcatcccgaccttcatttc
tcttttcccttttttgcaaaaggaaaagaagagacttctgtaacatatatggaagaatgg
cgggctgcttttttgaaaaatccatacctcagtcttgaatattggagaggacagctcgaa
gcagataataaacaagcgaatatcaatatagcagaagcgcatgatattatcaaaaaacta
agtttgaaagcctttgaagcagaatataaaatccttatcatgtggctgccggaatacctg
gatacacagggtaatgctctgctcaaattaatagaggaaccaccggaaaaaacccttttt
ctactggtgtctgaaaatcaggatcgcatattaaatactattatttcccgtacacagctt
gtcaaaattcaaaaacttccgcatcaggatattacaaattatctggtagaagaaagggga
attcagaaagaacaggccggagaaattgcatttattgcagacgggaatcttcaacaggcg
ctcaatctgctctcagaatcaggtaatcatctggacttactgatccggtggctgcgattt
attgtcagcgatgcaggcctgcatatgatcagtatatgtgacgatgagttgtcaaaactg
ggaagagagaatcagaaaagctttcttttgtatgccataaatatgatgaggcagattatc
cttatcaaggaagaattgcatgatcttgtgttccttccggagaaggaattggagtttgta
aacaaatttgcgcctctttttactgtgaatcagatcgaagaagctgtatctttatttgaa
aaaacacattattgtgtagaacgcaatgcaaatcctaaaatattatttttagatttatct
ttgcaattagttttattatttaagtatcaaacgttcccaaaagggactcaatatatataa
DBGET
integrated database retrieval system
