Sphingobacterium spiritivorum: I6J01_08335
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Entry
I6J01_08335 CDS
T07566
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6J01_08335 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_08335 (recO)
DNA repair and recombination proteins [BR:
sspi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I6J01_08335 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I6J01_08335 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QQT37394
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All DBs
Position
complement(1995475..1996197)
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AA seq
240 aa
AA seq
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MLHKTKGIALKLTNYSESSVVVQVYTESFGLQSYLVNGAKKPKAKIKANLFQPLHLLELI
VYHKDNNNLQRISEAHQTPPLLDLPYNIIKSSIAIFLNEVLYKSLKQQQHDGFLFNFIFQ
SIRYLDETDHSLANFHLTFLIKLSMFLGFLPNVGTKVLPYFDLREGNFSSSLPAHSDVLQ
PPHTEIFHQLIGSTYASAAALKINKEERALLLSKILDFYNIHVANFGEINSVYILEEIFR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcttcataaaacaaaaggtatagccctcaaactgacaaactactctgaaagtagtgta
gttgtacaggtctatactgaaagtttcggactacagtcctatctggtcaacggggctaaa
aaaccaaaagcaaagataaaggcaaatctctttcagccccttcatctgctggagctgatc
gtatatcacaaggataataacaatctgcaacgtatctctgaagcacaccagacacctcct
ttgctggatctgccctacaatattataaagagctctatcgctatctttcttaatgaagtg
ctgtacaagtcattgaagcaacagcaacatgacggttttctgtttaattttatttttcag
tcaatacgctatctggatgaaacggaccatagcctggcaaactttcatcttacttttctt
ataaaactgagcatgtttttggggtttctcccaaatgtgggaacaaaagttctgccctat
tttgacctgagagaaggaaacttcagcagctctttgccggcccacagtgatgtactacag
cctccgcatactgaaatatttcatcagcttatcggatcgacctatgcctctgctgcagcc
cttaaaatcaataaagaagagcgtgccttactgctctctaagattctggacttttataat
atacatgttgcgaattttggggaaataaattctgtatatatacttgaagaaatattccga
taa
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