Sphingobacterium spiritivorum: I6J01_08365
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Entry
I6J01_08365 CDS
T07566
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sspi
Sphingobacterium spiritivorum
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspi03009
]
I6J01_08365 (rimO)
Enzymes [BR:
sspi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I6J01_08365 (rimO)
Ribosome biogenesis [BR:
sspi03009
]
Prokaryotic type
ribosomal protein modification factors
I6J01_08365 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QQT37400
LinkDB
All DBs
Position
1998567..1999901
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AA seq
444 aa
AA seq
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MKTKSVRSAEIKQKPRVNVITLGCSKNIHDSEVLMGQLKGNQMEVVHEASNIQNNDIVVI
NTCGFIDNAKQESIDTILQYSELKEQGKINKVIVTGCLSERYKPELQAEISSVDAYFGTN
DLPELLSSIGADYRHELLGERMLSTPLHFSYFKIAEGCNRPCSFCAIPLMRGKHVSKPME
DLVKEAKFLASNGTKELILIAQDLTYYGLDIYGKRNLSDLLRNLSDVDGIEWIRLQYAYP
SGFPMDILDAMAERSNICNYLDMPLQHISDNMLKSMRRGTTKQKQIDLVNQIRDKVPDIA
LRTTLICGYPGETEQDFQEMLEWVEESRFDRLGCFTYSHEEKTHAYSLTDDVPEEVKESR
VEQIMEVQQGISYDINQEKIGKTYKVLVDKVDGDYFIGRTEYDSPEVDNEVLISAKDTYA
RIGDFVQVKIDRAEDFDLYGTIVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaatctgtaagatctgctgaaattaagcagaaaccccgtgttaatgtgatc
acgttgggatgttccaaaaacattcatgacagtgaagtgctgatgggacagttaaaaggg
aatcaaatggaggtggtacatgaggcctctaatattcaaaataatgatattgtggttatc
aatacctgtggttttatcgataatgccaaacaggaatctattgataccattcttcaatac
agcgagctcaaagagcaaggtaaaatcaataaggtgatcgtaacgggttgtctgtccgaa
cgttataagccggagttgcaagctgaaatttccagtgtagatgcttacttcggaacaaat
gatttgcctgagttattatccagtataggagcagattaccgccatgaattactgggtgag
cgcatgctgtctacacctttacacttttcatattttaaaattgcagaaggctgtaacaga
ccatgttcgttctgtgctatcccgttgatgcgcggaaagcatgtttccaaaccgatggaa
gatctggtaaaagaagcgaaattcctagcctctaatggtacaaaggaattaattcttatt
gctcaggatctgacttattatggtctggatatttatggtaagcgtaatctttctgatctt
ttgcgtaatctttctgacgtagacggtatagaatggattcgtcttcaatatgcttatcct
tccggatttccaatggatatactggatgcaatggcagagcgatcgaatatctgtaattac
ttagatatgcctcttcagcacatttcggataatatgctgaaatctatgcgtagaggtaca
acaaaacaaaaacaaattgatctggtgaatcagatccgggataaagtgccggatattgct
cttcgcacaacattaatctgcggatatcccggtgagactgaacaggactttcaggagatg
ttggaatgggtagaagaatcccgttttgaccgcctgggctgttttacctactcacatgaa
gagaaaacccatgcttattcgttaacggatgatgtaccggaagaagtaaaagaatcccgt
gtagaacagattatggaggttcagcaaggaatttcatacgatattaatcaggagaaaata
ggtaagacctataaagtgctggttgataaagtggatggtgattatttcatcggacgtaca
gaatatgactctcctgaggttgataatgaggtgttaatctctgcaaaagatacctatgcc
cgcataggagattttgttcaggtaaagattgaccgtgctgaagactttgatctttatggg
actattgtcaaataa
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