Sphingobacterium spiritivorum: I6J01_08645
Help
Entry
I6J01_08645 CDS
T07566
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I6J01_08645 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_08645 (xseA)
Enzymes [BR:
sspi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
I6J01_08645 (xseA)
DNA repair and recombination proteins [BR:
sspi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I6J01_08645 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
YlqD
Motif
Other DBs
NCBI-ProteinID:
QQT37453
LinkDB
All DBs
Position
complement(2070304..2071578)
Genome browser
AA seq
424 aa
AA seq
DB search
MPEVIDNKTIFSLLEVTKSIQKTIADRYKSMYWIKAEMNKLNHYTHSGHCYPELVEKKDG
KIVAEIRSILWKADYNRININFMKTVREPLREGITMLFQASISYDPMYGLSLKIVDIDPT
FSLGELEKEKLESIQRLKEEGIYDLNKSLPFPVIPKRIAIISVETSKGLSDFYKIIHQNP
WGYRFECTLYPALLQGDKSVPSIIQQLSIVAEHQDKYDVIAIIRGGGGEVGLSSYNNYLL
ARAIAIFPLPVLTGIGHSTNLTVSEMVAYKNAITPSELADFLLQKFHNFAIPLDRATETI
RNYSSLIFEQQAQKLNVFATDIRWTTQHMVEMAKNNIHILEKDLKAGFQQQVKEKFSFLE
NTEKLLQLADPVHLLQRGFSITKINGQLLTSATQVKPGDNISTRVQDGEISSTVHATNTL
QYGD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgccagaggttatcgataataaaaccattttctccttactggaagtgacgaaaagtatt
caaaagactattgcggatcgttacaagagtatgtattggattaaagcggagatgaataag
ctgaatcattacacgcattccggacattgttatcccgaactggttgagaaaaaagacggt
aaaattgtcgcagagatccgttctatcctctggaaagctgactacaaccggatcaatata
aattttatgaagacggtacgcgaaccgctccgggaaggtatcaccatgctttttcaggcc
agcatctcctacgatcctatgtacggattaagtctcaaaattgtagatatagatccgaca
ttctccctgggcgaactggaaaaagagaaactggagagcatacaacgtcttaaagaagag
ggcatctacgatctgaacaagtctctcccttttcctgtaattcccaaacgtattgctatc
atatccgttgaaacaagtaagggattatcggatttttacaaaatcattcatcagaatccc
tggggataccggtttgaatgcacactatatccggctctgttgcaaggggataaatctgtg
ccttctattattcaacaattgagtatagtcgccgagcatcaggataaatatgatgtgatc
gccataatccggggaggaggaggagaagtcggactatccagctataacaattatcttctg
gcaagagctatagctatatttccgttgcctgtcctcaccggaatcggacattcgacaaac
ctcacggttagtgaaatggtggcttataaaaacgcaattacaccaagtgaattagctgat
tttctcctgcaaaaatttcataattttgctattccgctggatcgcgccaccgaaacaatc
cgaaattacagtagtctgatatttgaacaacaagctcagaaactgaatgtctttgctaca
gatatcagatggactacgcaacatatggtcgagatggccaaaaacaatattcatatcctg
gaaaaggatcttaaagccggatttcagcaacaggtaaaagaaaagttctcatttcttgaa
aacacagaaaaactgctgcagttagccgatccggtacatctgctgcaacgcggattttca
ataacaaaaataaacgggcaattactgacttcagcgacacaggtcaaaccgggagacaac
atcagcacacgcgtgcaggacggagaaatctccagtacagtacatgccactaatacccta
caatatggagactaa
DBGET
integrated database retrieval system
