Sphingobacterium spiritivorum: I6J01_09190
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Entry
I6J01_09190 CDS
T07566
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi03030
DNA replication
sspi03430
Mismatch repair
sspi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6J01_09190
03430 Mismatch repair
I6J01_09190
03440 Homologous recombination
I6J01_09190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspi03032
]
I6J01_09190
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_09190
Enzymes [BR:
sspi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6J01_09190
DNA replication proteins [BR:
sspi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6J01_09190
DNA repair and recombination proteins [BR:
sspi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6J01_09190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
HP1454-like_middle_dom
Motif
Other DBs
NCBI-ProteinID:
QQT37557
LinkDB
All DBs
Position
2195202..2195813
Genome browser
AA seq
203 aa
AA seq
DB search
MALQSFIAIDFELATAAYNSVCSVGIVRVDQGVITDEFYSLVKPPKNEYMWQTTRVHGIK
PKDTADAPTFEEIYPKIKDLLQNRKMVAHNEKFDREVLSKTMKACGLDYRELHLPVMWEC
TSKIYRDKGFKKTKLNLCCEIMGIDLNHHEALSDAKAAAFLYLKQNEVTQELLDRVFPAE
ELLIQPDEIAKKSESHNGSDGVV
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcattacaatcatttattgcaatagatttcgagttggcaactgctgcttacaatagt
gtatgttctgttggtattgtacgtgttgaccagggagtaatcacagacgaattttatagt
ctggtcaaacctccgaagaatgaatacatgtggcagacaacgcgtgttcatggaatcaag
cccaaagacactgcagatgcacctacttttgaggagatctatccaaagattaaagatctt
cttcagaacagaaagatggttgctcataatgaaaagttcgatcgggaggtgctatctaaa
acaatgaaggcatgtggtctggattatcgtgaacttcatttaccagtcatgtgggaatgt
acaagcaaaatctatagggataagggctttaaaaaaacaaagcttaatttatgctgtgag
atcatgggtatagacctgaatcatcatgaggctttatcagatgcgaaggcagctgctttc
ctttacctgaagcaaaatgaagtcactcaggagttgttagatcgtgtatttcctgcggaa
gaattattgattcagccggatgagattgctaaaaagagcgagtcacataacggaagtgat
ggtgtcgtgtag
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