Sphingobacterium spiritivorum: I6J01_09825
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Entry
I6J01_09825 CDS
T07566
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6J01_09825 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspi03019
]
I6J01_09825 (groL)
03110 Chaperones and folding catalysts [BR:
sspi03110
]
I6J01_09825 (groL)
03029 Mitochondrial biogenesis [BR:
sspi03029
]
I6J01_09825 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspi04147
]
I6J01_09825 (groL)
Enzymes [BR:
sspi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
I6J01_09825 (groL)
Messenger RNA biogenesis [BR:
sspi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
I6J01_09825 (groL)
Chaperones and folding catalysts [BR:
sspi03110
]
Heat shock proteins
HSP60 / Chaperonin
I6J01_09825 (groL)
Mitochondrial biogenesis [BR:
sspi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
I6J01_09825 (groL)
Exosome [BR:
sspi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
I6J01_09825 (groL)
Exosomal proteins of other body fluids (saliva and urine)
I6J01_09825 (groL)
Exosomal proteins of breast cancer cells
I6J01_09825 (groL)
Exosomal proteins of colorectal cancer cells
I6J01_09825 (groL)
Exosomal proteins of bladder cancer cells
I6J01_09825 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QQT37676
LinkDB
All DBs
Position
2357227..2358864
Genome browser
AA seq
545 aa
AA seq
DB search
MAKQVKYNVEARDALKKGVDTLANAVKVTLGPKGRNVIIEKKFGSPAITKDGVTVAKEIE
LKDALENMGAQMVKEVASKTADQAGDGTTTATVLAQAIIAPGIKSVAAGANPMDLKRGID
KAVATVVANLKSQSQVVGQDNNKIKQVATISANNDEVIGSLIAEAMEKVGNDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTNSDKMEAELDNPYILIYDKKISNMKELLPVLEKQ
VQTGKPLLIIAEDLDGEALATLVVNKIRGSLKVAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYKLENAELSYLGQAEKVVVDKDNTTVINGGGNGEDIKARVNQIKSQIETTTSDY
DREKLQERLAKLAGGVAVLYVGATTEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFI
RATESLANLKGENEDETIGIEIIKRAIEEPLRQICNNAGVEGAVVVQKVKEGTADFGYNA
RTDKYENLIGAGVIDPTKVSRVALENAASIASMLLTTECVLADEPEENGAGAGAPPMGGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagtaaaatataacgttgaagctcgtgacgcactgaaaaaaggtgtagac
acattggcaaatgctgtaaaagtaacattaggtcctaaaggtcgtaacgtaattatcgag
aaaaaatttggttcaccggcaatcactaaagatggtgtgacggtagctaaagaaatcgaa
ttgaaagatgcgttggaaaatatgggtgcgcaaatggtgaaagaagtagcatctaaaaca
gctgatcaggctggtgatggtacgactacagctacagtattggcacaggctatcattgct
ccgggtattaaatctgtagcagctggtgctaatccaatggatctgaaacgtggtattgac
aaagctgtagctactgttgtggctaacctgaaatctcaatctcaggttgtaggtcaggac
aacaataagatcaaacaagtggctacaatctcagcaaacaatgacgaagtaatcggttca
ttgatcgctgaagcaatggaaaaagtaggtaatgacggtgttatcacagtggaagaagca
aaaggtactgaaacagaagtaaaaactgtagaaggtatgcaatttgaccgtggttactta
tctccgtatttcgttactaattctgataaaatggaagcagaattggataacccttacatt
ttgatttacgataaaaagatcagcaatatgaaagaattgttgcctgtattggaaaaacaa
gtacagacaggtaaaccattattaatcatcgctgaagatcttgacggagaagcattggca
acattagttgttaataaaattcgtggttcattgaaagttgcagcggtcaaagctcctgga
ttcggtgaccgtcgtaaagcaatgttagaagatattgctatccttacaggaggtacggtt
atctctgaagaaagaggatataaattagagaatgctgagctttcttacttaggacaggct
gaaaaagttgttgttgataaagacaatacaactgtgatcaatggtggcggaaatggtgaa
gatatcaaagcccgtgtaaaccagattaaatctcagatcgaaaccactacttctgattac
gaccgcgaaaaattacaggaacgtcttgctaaattagcaggtggtgttgccgttctttac
gtaggtgctactactgaagtagaaatgaaagagaaaaaagaccgtgttgatgatgcttta
catgctactcgtgcagcagtagaagaaggtatcgttgctggtggtggtgttgcatttatc
cgtgcaacagaatctttagctaacctgaaaggtgaaaatgaagatgaaactatcggtatt
gagatcatcaaacgtgctatcgaagagcctttgcgtcagatttgtaataatgcaggtgta
gaaggcgcggtagtagtacagaaggtaaaagaaggtactgctgactttggttacaatgca
cgtacagataaatacgaaaacctgatcggtgcaggtgttatcgatccgactaaggtttca
cgtgtagcattggaaaatgcagcttctatcgcttctatgctattgactacagaatgtgtc
cttgcagatgagcctgaagaaaatggcgctggcgctggtgctcctccaatgggtggcggt
atgggcggaatgatgtaa
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