Sphingobacterium spiritivorum: I6J01_11125
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Entry
I6J01_11125 CDS
T07566
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sspi
Sphingobacterium spiritivorum
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspi03016
]
I6J01_11125
Enzymes [BR:
sspi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
I6J01_11125
Transfer RNA biogenesis [BR:
sspi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
I6J01_11125
Prokaryotic type
I6J01_11125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
DUF745
Motif
Other DBs
NCBI-ProteinID:
QQT33909
LinkDB
All DBs
Position
2651532..2652443
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AA seq
303 aa
AA seq
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MKFEVLILGNSSATPMYERHPSSQLLNFNEQFFLIDCGEGTQMQLFRYGIRSNRIGHIFI
SHLHGDHYLGLVGLLSSMHLVGRKSGLHLYGPAPLKEILDVQFRHSDTQLRYNLIFHPTN
PDKEEVILETAAFKVSTFPLTHRIPCTGFRFDEGKRSPAIIAELVEQLNIPKQYIGGIKR
GLDYTAPDGKVYKAAELTIPPPPSRSYAYCSDTVRVPDYIAAISNVDLLYHESTFLHEMV
ERAKETLHTTAQEAAEIAKEAGAHKLLLGHYSARYRELQPLLEEAQHVFKNTQLSVEGKW
FSV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaagttttgattttggggaatagctccgctacaccgatgtacgaacgtcat
ccttcgagtcaactcctcaattttaatgaacagttttttctgatcgattgtggagaaggc
acgcagatgcaactattccgctatggtatccgtagcaatcgcataggtcatatatttata
agtcacctgcatggtgatcattatctgggacttgtcggactattgtcttccatgcacctg
gttggccgcaagtctggcctgcatttatatggcccggcacccctcaaagagatactggat
gtacagttcaggcattcggatactcaattacggtacaacctgatctttcatcctactaat
ccggataaagaagaagtcattctggaaactgctgctttcaaagtaagtacgtttccgctt
actcatcgtattccctgtacaggattccggtttgatgaaggaaagcgttcgcctgcaata
atagcagagctggtagaacaactgaacattcctaaacaatacataggcggaataaaaaga
ggactggattataccgctcccgatggaaaagtatataaagctgcagagctgaccataccg
ccgccgccctcgcgaagctatgcttattgttcggatacggtacgtgtgccggactacata
gcagcgatcagcaatgtagatctgttgtatcacgaatctacttttttacacgaaatggtc
gaaagggccaaagaaacattgcataccacggcacaggaggctgccgaaattgcgaaagaa
gcaggtgcacataaattgcttctgggacattattctgcaaggtaccgtgaattacagcca
ttattggaggaggcacagcacgtttttaagaatacccagctttcagttgaaggtaaatgg
ttttctgtatag
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