Sphingobacterium spiritivorum: I6J01_12395
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Entry
I6J01_12395 CDS
T07566
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sspi
Sphingobacterium spiritivorum
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspi03400
]
I6J01_12395
Enzymes [BR:
sspi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
I6J01_12395
DNA repair and recombination proteins [BR:
sspi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
I6J01_12395
Prokaryotic type
I6J01_12395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QQT34144
LinkDB
All DBs
Position
complement(2986641..2987954)
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AA seq
437 aa
AA seq
DB search
MSAVPTVIFWFRRDLRLQDNHALFRALNSEAAVQPVFIFDSTILTRLDDPADARVTFIYQ
QLQLLQEQLKPYGSSIRTYYGEPATVWEEIYEEYTPTAVYVNSDYEPAAITRDLLVRGIL
QQYKVDFNTFKDQVIFEKAEIVKNDGLPYTVYTPYKNKWLTTLEEQLPLPSYTSENLLKN
LRQASYALPSLQDLGFSLSTIPFPEKTFFTAIADYADTRDIPGLENGTSHLGIHLRFGTI
SIRKLVERAYPSQNKTYLHELIWREFFMMCLWHFPHTVNHAYYSKYDHIRWENNVAHFEA
WCNGQTGYPLVDAGMRELNTTGFMHNRVRMLTASFLCKHLLIDWRWGEAYFAQKLLDYDQ
SANIGNWQWAAGCGMDAAPYFRIFNPTLQTKKFDPQFVYIKKWVPEFQDFSYPPPIVEHA
WARDRALARYKAGFEHS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggtaccaacagtcatattttggtttcgacgtgacctgagactccaggataat
cacgctctattccgtgctttaaattcagaagctgcggtacagccggtttttatatttgac
tcaacaatactgaccaggctggatgatccggcggatgccagagtaacatttatttaccag
caacttcaactcctacaggaacaactgaagccttatggcagtagtatcagaacgtactat
ggtgaaccggcaacagtatgggaagagatatatgaagaatacacccccactgcagtatat
gtaaattcggattacgaaccggctgcgattaccagagatcttcttgtccggggaatttta
cagcaatataaggtcgattttaacacattcaaagatcaggttatctttgaaaaagctgaa
atcgtcaaaaatgacggactgccatatacggtatatacgccttacaaaaacaaatggctc
acaacattggaggaacagcttccgcttccgtcttatacttccgagaatctccttaaaaat
cttcgtcaggcgagttatgctctcccttctttacaggatcttggcttttctctgtcaaca
attccatttcctgaaaaaactttctttacagcaatagctgactatgctgatacaagagat
ataccaggccttgaaaacggaacttctcatttaggtatacatctgcgtttcggaacgatc
agtataagaaaattagtagaacgggcttacccgtcacagaacaaaacctacctgcatgag
cttatctggcgtgagttttttatgatgtgcctgtggcattttccacatacggtcaaccac
gcgtattacagcaaatatgatcacatccgatgggaaaataatgtagctcactttgaagcc
tggtgtaacggacagaccggatatccgctggtggatgccggaatgcgtgaattaaacacg
actggttttatgcacaatcgggtacgtatgctgacagccagtttcctctgcaagcatctg
ttgatcgactggagatggggagaggcttattttgcacagaaattattagattatgatcaa
agtgcgaatatcggcaactggcaatgggctgcaggttgcggcatggatgcggcaccctac
ttccgtatctttaacccgaccctacaaaccaaaaaatttgatcctcaatttgtttatatc
aaaaaatgggtacctgaatttcaggacttcagttatcctcctcccattgtagaacatgca
tgggcaagagatagggcattagcccgatataaagccggttttgagcattcataa
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