Sphingobacterium spiritivorum: I6J01_12885
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Entry
I6J01_12885 CDS
T07566
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi00061
Fatty acid biosynthesis
sspi00071
Fatty acid degradation
sspi01100
Metabolic pathways
sspi01212
Fatty acid metabolism
sspi02024
Quorum sensing
sspi04146
Peroxisome
Module
sspi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I6J01_12885
00071 Fatty acid degradation
I6J01_12885
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I6J01_12885
09145 Cellular community - prokaryotes
02024 Quorum sensing
I6J01_12885
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sspi01004
]
I6J01_12885
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspi04147
]
I6J01_12885
Enzymes [BR:
sspi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I6J01_12885
Lipid biosynthesis proteins [BR:
sspi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I6J01_12885
Exosome [BR:
sspi04147
]
Exosomal proteins
Exosomal proteins of breast milk
I6J01_12885
Exosomal proteins of breast cancer cells
I6J01_12885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QQT34232
LinkDB
All DBs
Position
complement(3092824..3094599)
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AA seq
591 aa
AA seq
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MNTLTRVFDFITRYKEEFSKPVMVAGKREGKWKTYSTDEFIEIIDNISKAMLARGVKKGD
RIALMSGNRPEWNFVDFAANQIGAAIVPLYPTLSSQDLTYIIADAEVRSIFVSNAELTAK
VKTALKENNLEINLFTFEKIDDLPTLDDVIAFGKEQDIDLKPYKDAVSEDDLLTLIYTSG
TTGKPKGVLLTHKNVMSNVNASNHLLKTEYNKALSFLPLCHIFERMVVYLYFSRGVQIYY
AENLDNIVADINEVKPMAFTTVPRVLEKVYDKIVEKGKALTGIKKALFFWALELGHKYQE
PEKNGAFYNFKLGIARKLIFSKWKEALGGEIKLIVSGGAALQERLARVFWAAGIQVLEGY
GLTETSPVIAVNTWQPNGVRFGTVGKVLSNLDVKIGQDGEILVKGPSITAGYYKNQEATK
EAIDEEGYFHTGDIGELSKDGFLKITDRKKEMFKTAGGKYVAPQVLENKFMESTLIGQVM
VLGENRKFPSALIVPAFEELEKWCKHKGIAYTSKDEIIKDPKVIEKYQSEIDRLNAGFGH
WEQVKKFKLLNKEWSIDSGELTPKLSLKRKIILQKFEDTINGIYEETGSKS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattaacacgagtattcgattttatcacacgttataaagaagaatttagcaag
cctgtaatggttgccggaaaaagggaaggcaagtggaagacatattcaaccgacgaattt
attgagatcatcgataatataagtaaggctatgctggccagaggggtgaaaaaaggagat
cgcatagcgctgatgtccggcaatcgtccggaatggaactttgtagatttcgcagccaat
cagataggggcagctattgtacctttataccctacgctttccagtcaggacttaacctat
ataatagcagatgctgaagtccgttctatttttgtaagcaatgcggagctgacagctaaa
gtcaaaacagcgctgaaagagaataatctggaaattaacctgtttacattcgaaaaaata
gatgacctgccgacactggatgatgtgatcgcattcggaaaagagcaggatatcgacctg
aagccctataaggatgcggtatctgaagacgatctgctgacgcttatctatacttcagga
acgactgggaaaccaaagggggtattgctgacgcataaaaacgtcatgagtaatgtcaat
gcctcaaatcacctcctgaagacagaatacaataaggcattaagtttccttccgctctgc
catatttttgaacgtatggttgtttatctgtatttctcccgtggtgttcagatatattat
gcagaaaatctggacaatatcgtggcagatatcaatgaagtaaagccaatggcatttacg
acggtaccacgtgtactggaaaaagtgtatgacaagattgtagaaaaaggtaaggcgctt
actggaatcaaaaaagctttattcttctgggcattggaacttggccataaatatcaggaa
cctgaaaaaaacggagccttttacaattttaaactgggtattgcccgcaagctgatcttc
tccaaatggaaagaagcattgggcggcgagatcaagctaattgtatctggaggagcagcc
ttacaggagcgtctggcccgtgtgttctgggctgccggcatacaagtactggaaggttac
ggactgaccgagacttcaccggttattgcggtcaacacctggcaacctaatggagttcgt
ttcggtacagtcggaaaagtattaagtaatctggatgtgaaaatcggtcaggatggagag
atattagtgaaaggccccagtattactgccggatattataaaaatcaggaggctactaaa
gaagctattgatgaagaaggatattttcacaccggagacataggcgaattatctaaggat
ggcttcctgaaaatcaccgatcgtaagaaggagatgttcaaaactgcaggtggtaaatat
gttgcgccacaggtattggaaaacaaattcatggaatctacgttaattggacaggtaatg
gtgcttggagaaaaccgtaaattcccgtcagcattgattgttccggcatttgaagagctg
gaaaaatggtgtaaacacaaaggcatagcctatacctccaaagatgaaatcatcaaagat
cctaaagtcatcgagaaatatcaaagtgaaatagatcggttaaatgcgggattcggacat
tgggagcaggttaaaaaattcaaattgctgaataaagaatggagtattgacagcggcgaa
ctcacaccaaaactaagtttaaaacgtaaaattattcttcagaaattcgaagataccatc
aatggtatttatgaagaaacaggaagtaaaagttaa
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