Salvia splendens (scarlet sage): 121740863
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Entry
121740863 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121740863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121740863
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121740863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_14
RuvB_N
AAA_22
AAA_5
AAA_16
Rad17
AAA_2
RNA_helicase
AAA_18
IstB_IS21
NPHP3_N
AAA_28
AAA_33
ABC_tran
Mg_chelatase
nSTAND3
ATPase_2
TsaE
DUF815
AAA_7
CPT
nSTAND_NTPase5
Parvo_NS1
HTH_49
DUF3931
Motif
Other DBs
NCBI-GeneID:
121740863
NCBI-ProteinID:
XP_041989438
LinkDB
All DBs
Position
7:12090428..12097547
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AA seq
730 aa
AA seq
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MTREKGSTAVALRRHIESVSSGKENLTDEQVVGLLCSLHRLTYCRLDRNLLTERVAKITQ
LQRRRAGVISQDPAPFSARRQKINEPAPFSAKRKKINEVSGSPLEKGDCSINPKTIWNLG
RSDELGHGRGEMNMNGGRSESESESESESEKHSRPIFRDFLGITSVIDELKQEVVRPLHQ
LKLLRHLGVEPTSRILLHGPPKCGKTMLARAVANEARLPLFEISVARLMRGDLGAAEEKI
RRLFLTAYIRAPSVVFIDEIDAMTSVKKRTLKEVEYRIVDQLMAFMDGRDRPTGPVNDDV
SFESSNSTPGYVLVIGATNRPDALDTALRRLFDREFALGVPDECERFDILSALTRNLKVE
VGFDPRKLARSTMGYVAGDLVALAKKAGMLAVHSIMGKRNSEYLKEPRHMVEHEECYTRP
FYDEELENLSITMKHFVQAGKMVQPSAIMKDFFTTLHAKWDDVGGLEALKSEFERHVVKA
IKYPRVYEDIKTSVLSSFLLCGPSGCGKTLLVKAVAKEAGANFMHIKARDLLKFGDQCEM
VVHNIFSYASTHIPCVLFFDELDVMPSRDDVPRWPDFRKLISELSDTELTMEGVLVFGAT
NRPEIVSHSSLIKTQFDRLLYVPLPTPEERGAILKALTRGKPIDPEVDLMALGNDVACEN
FSGRDLFALVTEASKFAINRPALSVGNRMTIKDADFESALAKVSPSLSATEVKKWELHSK
KIVVHSISVD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacgagagaaaaaggcagcaccgctgtggctctccgccgccacatcgagtccgtctcc
agcggcaaagaaaacctcaccgacgagcaagtagtaggcctactctgctcgttacaccgg
ctcacctactgccgtcttgatcgcaacctcctaaccgaacgcgtcgccaaaatcacccag
ctccagcgccggagagcaggcgtcatttcccaagatcccgctccgttctcagccagacgg
caaaaaatcaatgagcccgctccgttctcagcgaaacggaaaaaaatcaatgaggtctcc
ggcagtccattggaaaagggcgattgtagtattaatccaaaaacgatttggaatttaggg
cggagtgatgaattaggccatggcaggggagagatgaacatgaatgggggaaggagtgag
agtgagagtgagagtgagagtgagagtgagaaacatagtcggccaatttttagggatttc
ttgggaattactagtgtgattgacgaattgaagcaggaggtggttcggccactgcatcag
ctgaagctgctgcgccacctcggagtcgagcctacgtctcgaattctgctgcatgggcca
cccaaatgtgggaagaccatgttggccagagccgttgccaatgaggccagattgccattg
tttgaaatctctgttgctcgattgatgcgtggagatttaggtgcagcagaagaaaagatc
cgaagattgttcttaacagcatacattagagcaccatctgttgtgttcattgatgaaatt
gatgcgatgacttcagtaaagaaaaggacactgaaggaagtagagtatcgcatagtggat
cagttgatggcttttatggatgggcgagacagacctaccggaccagtaaatgacgatgtt
agttttgaaagttctaatagtacacctggctatgtgctggtgattggagccaccaatagg
cctgatgctcttgacactgccttaaggcgtttatttgatcgtgaatttgctttaggtgtt
ccagatgaatgtgaaaggtttgacattctgtcagctctaacgcgtaatcttaaggttgaa
gttggttttgatcccaggaaattagctaggtccactatgggttatgtagcaggagatttg
gtagctctagcaaaaaaggctggtatgcttgctgtacatagtatcatgggcaagagaaac
tcagagtatctcaaagaaccgaggcacatggttgaacatgaagaatgttacacgcggcca
ttttacgatgaagaattggagaaccttagcataaccatgaaacactttgtgcaagctgga
aagatggttcaaccgtctgcaattatgaaagattttttcaccacactacatgcaaagtgg
gatgatgttggaggtcttgaagcattgaaatcggagtttgaacgccatgtagttaaagcg
ataaagtatcctcgagtttatgaggacataaagacgagtgtccttagctcctttctcctt
tgtggtccttctggctgtggaaagacattgcttgtcaaggctgtggctaaagaagcagga
gcaaatttcatgcatatcaaggcccgtgatctattgaaatttggcgatcagtgcgaaatg
gtagtgcacaacatattcagttatgcaagcactcacatcccatgtgtacttttcttcgat
gagctggacgtaatgccctcacgtgatgatgtaccacgatggccggactttagaaagcta
atatcagagctgagtgatacagaattaacgatggaaggtgttcttgtgtttggtgcaaca
aacaggcctgaaattgtgagtcattcttcactcatcaaaacacaatttgataggcttttg
tatgttcctctccctactccagaagagcgaggtgcgatattgaaagctcttactcgaggt
aagccaatagatcccgaggtggaccttatggccctaggaaacgacgtggcctgtgaaaat
tttagtggccgtgatctatttgctttggtaacagaagcttctaaattcgccattaataga
ccagcattgtctgttgggaaccgcatgacaatcaaagatgcagatttcgagagtgcgttg
gcgaaagtctccccttctctctcagccacggaagtcaagaagtgggagcttcattctaag
aagattgttgttcatagcatttctgtggactga
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