Salvia splendens (scarlet sage): 121740876
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Entry
121740876 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121740876
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121740876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121740876
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121740876
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
121740876
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
121740876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
121740876
NCBI-ProteinID:
XP_041989461
LinkDB
All DBs
Position
1:complement(8853423..8864917)
Genome browser
AA seq
1452 aa
AA seq
DB search
MLGSSAYDDPSKAFVGIRFVLFGFDAVREEEVRSMLIEGGGVDTVNYGPYCNHVIVDKLV
FDDPICVAARRDGKVLVNGLWVEHSYDSGMPVDPTRVLYWPMRDLNGIPGAKSLVVCLTG
YQRQERDDIMNMVSLMGANFSKPLIANKVTHLICYKCEGEKYELAKKIGFAKLVNQLWLE
SCLKAWELLPEADYAKSGYELEMEAKAKYSEEETQDMSLVDVKKNDIINPHNIQIENKNL
HQSPERQGGSRNSGYVPAFESFANVGNTGKTRSTPRKENTSKTNSTPTKEKTSTQSSPRK
ETDFGKTSLSHDTHGDKLDTSYSSCSWSPAKMFSEVPFNVPDGKGNTENIEHALASTSGS
AKKSVDDGLSKLSSKSMKASLPLWSERTEINPGSPMSNVSKTGLRGGIDIPMERDLDATD
SHGIKSQLVGRLLLPNEGQTIGLPNKMKPTVPCGNSRSPVSSHSPKTLIKSGLATKAKET
SVSRSLVDGSCRVACDMSPVKGTSCFREEVTGAFVTPSGKIQDGTGSAVDKTPLKGDVLH
LDEENVSSLPRTKKMTVSRSGSKSRRLSRSSTTGASCLREEVDGSFVLPSENIHEGTESA
GTKTLLKGSLLYLDEEQQSSLPGTKKMAVLPSGSKSTKLSRSSKILMGSGLNTKSIEMAV
SGSPVCGTRQLAADVPPTNITSFLQEEVGDVLNMLSERDGDGTESGGIKTPIEGASVHLH
MEQTSSLRGRKATVSRSNSKSTKLSRSRSTLMGTVLGTKETDMLVSGTPIPASHQSVVDI
SPTNITSHLREEASLASKEALVTSTLLKERQECNDQTITLSRGRPKKQRLPDSDGKDLSL
RRTESCTEGQEIYQSDPPDFRPPFPSTSSTVEKLDDQADLNSSKVDHSGTKSKSPKKKML
ARKTLGSKPTICKGKSTKHKGLLSSVLQNKFIGHSNGAVGVEHKENASLAEKFVTVSSNR
NEDVPVGDETETPECEGLKKSAEVEEPHTSKQPGKKTTKKMEAKSKVKKSAEAKKSPELP
EPTSTVDVVEKKVAEGKKRPLTKSKTNKLKDHTKEAKQDEKEALLNNREKVVLSGKTAKR
PSKKLKGSHDVEKENEPVTNEQPSVSCDTGAAGKSTHKLKTPLKNGRANDLTTKTEPAWF
ILSGHRLQRKEFQQVIRQLKGKVCRDSHNWSYQATHFIVPDPIRRTEKFFAAAASGSWIL
KTDYLTASTEAGRFLSEEPYEWHKKCLTEDGAINLEAPRKWRLLRERTGHGAFYGMRIVI
YGECIAPPLDTLKRVVKAGDGTILATSPPYTRFLNSRVDFAIVSPGITRVDMWVQEFLRH
EIPCVLADYLVEYVCKPGYSLDKHVQYNTHAWAKSSLENLVKRVEEAVDEPKTPEENCVD
DAACQVCGSRDRGDEMLICGDESGSHGCGVGAHIDCLDPPLEAVPEEDWFCHDCCRKSSS
QSLKKRASKSKK
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaagttcagcatacgatgacccctccaaagcatttgtagggattcgatttgtt
ctattcgggttcgatgcagttcgtgaagaggaggtgcggtccatgcttatagaaggaggg
ggagttgatactgtgaattatggaccgtattgcaatcacgtgattgtcgataagcttgtt
tttgatgatcccatatgtgttgctgcacgaagagatggcaaagtattggtgaatggactt
tgggtggaacacagttatgattcgggaatgcctgttgatcctacccgtgttttgtattgg
ccaatgagagatctgaatgggattccaggagctaagtctctggttgtgtgcctgactgga
tatcaaagacaggagcgagatgatatcatgaatatggtttccctgatgggtgccaacttt
tcaaaaccattgatagctaacaaggttactcatctgatatgctacaagtgtgaaggagaa
aaatatgagcttgccaagaagataggattcgcaaagctagttaaccagctctggctagaa
agttgcctgaaggcttgggagctgcttccggaagccgattatgctaaaagtggatatgaa
ttggagatggaggctaaagctaaatattctgaagaagagacacaagacatgagcctagta
gatgtgaaaaagaatgacatcatcaatcctcacaatattcaaattgagaataaaaattta
catcagtcacctgaacggcaggggggttctagaaacagtggttatgtgcctgcattcgaa
agttttgcaaatgttggaaataccggcaaaacccgctccactcctagaaaggagaatacc
agcaaaacaaactcaactccaaccaaagagaagaccagcacccagtcaagtcctagaaaa
gagaccgactttggaaaaacatcattatctcatgatactcacggtgacaaacttgataca
tcatactcttcttgttcctggagtcctgctaaaatgttctctgaggtgccatttaatgtg
cccgatggtaaaggaaacactgaaaacattgagcatgccttagcttcaacatctggaagt
gctaagaagtcagtagatgatggcttgtccaaattaagtagtaagagtatgaaggccagt
ctccctctgtggtcagaaagaactgaaattaatccaggcagtcccatgtcaaatgtaagt
aaaaccgggcttcgtggaggtattgatataccaatggagagagatctggatgcaactgat
tctcatggcatcaaatcacaattggtgggaagattgttgctcccaaatgagggacaaacc
attggtttgcccaataagatgaaaccaactgttccctgtggtaattcgagatcgccagtt
tcaagccattctccaaaaacattgatcaagagtggattggctacaaaagcgaaggaaacg
tcggtttctagatctttagttgatggttcatgtcgagtagcctgtgatatgtctccggtt
aaaggtactagctgttttagggaagaagttactggtgcttttgtcacgccatcagggaaa
attcaagatggaactggatctgctgtagataaaactcctttaaagggagatgtgttgcac
ctcgatgaggaaaatgtaagcagtttgccccgtacaaagaaaatgaccgtctcacgtagt
ggttcaaaatcaaggagactaagccgttcttcaactaccggagctagttgtttgagggaa
gaagttgatggcagttttgtcctgccatcagagaacattcatgagggaactgaatctgct
ggaacaaaaactcttttaaagggatccttgttgtaccttgacgaggaacaacaaagcagt
ttgcctggtacgaagaaaatggccgttttacccagtggttcaaaatcaacaaagctaagc
cgatcttcaaagatattaatgggaagtggattgaatacaaaatcaattgaaatggcggtt
tctggatctccagtttgtggtacacgtcaattagctgccgatgttcctcccacaaatatc
actagttttttgcaggaagaagttggcgatgttcttaacatgctgtctgagagggatgga
gatggaactgaatctggaggaataaagactcctatagagggagcttcagtgcaccttcac
atggagcaaaccagcagtttgcgcggtaggaaagctactgtttctcgtagtaactccaaa
tcaacgaaactaagccgttctcggagcacgttaatgggaacagtattgggtacaaaagag
acagacatgctggtttctggaactccaatccctgcttcacatcaatcagttgttgatata
tctccaacaaatatcaccagccatttgagagaggaagcttcactggcctctaaagaagct
ttagtcacgtctactctacttaaggaaagacaggagtgcaatgatcaaacaattacatta
tctcgaggaagacccaaaaagcagaggttgcctgattccgatgggaaggacctttctctg
agaaggaccgaatcttgcaccgagggacaagaaatatatcaaagtgatccaccagatttc
agacccccatttccgagtacaagctctacagtagagaaactggatgatcaagcggatttg
aactcttcaaaggtagatcacagtggtaccaagtcaaaatccccaaagaaaaagatgctt
gccaggaagacattgggttccaaaccaactatctgtaaagggaaatctacaaaacataaa
ggcctgctttcttccgtattgcagaacaagttcataggtcattcgaatggagcagtaggc
gtggaacacaaagaaaatgcttctcttgccgagaagtttgtcaccgtctcttcaaaccgc
aatgaagatgtacctgtaggtgatgaaactgaaactccagaatgcgaagggctgaagaaa
tctgcagaagtcgaagaacctcatacaagcaagcaacctggcaaaaaaaccacaaaaaag
atggaggcaaaatcaaaggttaagaagagcgctgaagctaaaaagtctccagagttgcca
gaaccaacatcaactgttgatgttgtagagaaaaaggtagcagagggcaagaaacgtcct
ttgaccaagtctaagacgaataagttgaaggatcataccaaggaggccaaacaagacgag
aaggaggctctcttgaacaatcgagaaaaggttgtgttgtctggtaaaactgctaaaaga
ccatctaagaaactgaaaggttcacatgacgtggagaaggaaaatgaacctgttacaaat
gagcaaccaagtgtaagctgtgatacgggagcagctggaaagtctactcataaacttaaa
acacctctaaaaaatggccgggcaaatgacctaaccaccaagaccgaacctgcatggttt
atattgagcgggcataggcttcaaagaaaggagtttcagcaggttataaggcaattaaaa
ggaaaagtatgcagggactctcataattggtcgtatcaagcaacacatttcattgttccg
gatccaattcgaagaactgagaagttctttgcagctgctgcatctggaagctggattctc
aaaactgattatctaactgctagcaccgaggctggaaggtttttgtctgaagagccatat
gaatggcataagaaatgcttaactgaagatggagcaatcaacttagaagctccaaggaaa
tggcgtcttctgagggagagaacaggccatggtgcattttatggaatgcgtatagtcatt
tatggagagtgcattgctcctccactggatactttgaagcgtgttgtaaaggctggagat
gggaccatactcgcaacctcgcctccatacacgcgttttctaaattcaagggttgatttt
gccattgttagcccgggcattacccgtgttgacatgtgggtgcaggagtttctcagacac
gagataccctgtgttcttgctgactatctggtagagtatgtgtgcaagcctggttattcc
cttgataagcatgtgcaatacaacactcatgcttgggcgaagagttcacttgagaatctg
gttaaacgtgtggaggaggcagttgatgagcctaaaacaccagaagagaactgcgttgat
gacgcagcatgccaagtgtgtggatcgcgtgacagaggagatgagatgctcatatgtggt
gatgagagtggtagtcacggatgtggtgtcggtgcccacattgactgccttgatcctcca
cttgaggctgtgccggaggaagactggttctgccatgactgctgccggaaaagtagtagc
cagagtttgaagaaacgagcctcaaaatcgaaaaagtga
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