Salvia splendens (scarlet sage): 121741051
Help
Entry
121741051 CDS
T07627
Name
(RefSeq) RNA-binding protein BRN1-like isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121741051
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121741051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RRM_5
RRM_occluded
RBD_DGKtheta
Ligase_CoA
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
121741051
NCBI-ProteinID:
XP_041989675
LinkDB
All DBs
Position
7:25384600..25388100
Genome browser
AA seq
446 aa
AA seq
DB search
MAEGESVKLFVGQVPKQMSEVQLLQLLRDFALVDEVKLIRDKETRASRGCCFAICPSREE
ADKAVNACHEKITLPGASRLLQMKYADGELDRLEHKLFVGMLPKTVSDAEVSALFSVYGT
IKDLQILRGSGQTSKGCALFKFETIEQALAAIEALNGKHKMEGSSIPLVVKWADTEKERQ
TRKVRKALLQASTLQIASGQHQAVYGALPMSYVPTYNGYGYQTPGPYNFVRYRLPQLQNR
PTFPNLVPTTAQGRSICGAVPDPVPGTSPSNYAAPSANYIGSAYPTTPGVHYPWTHPRAI
MNNQQFGASSTLSPFSSSSQAVAASRVRASSVVHVEGPLGANLFIFHIPQQYGDIQLANL
FQRFGRVLSAKVFVDKTTNVSKCFGINSLKFFYLLQVIFNGFPSNEPLSVGFVSYDSPAA
AQNAINAMNGYQLGGKKLKVQLKRES
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggagagagcgtgaagctcttcgtagggcaagtgccgaaacagatgtcggag
gttcagctcctccaattgttgagagatttcgccctcgtcgacgaggtcaaactcatcaga
gacaaagagacgcgcgcttccagaggatgttgtttcgccatatgcccttctagagaggaa
gcagacaaggctgtcaacgcgtgccatgagaagattacgctgcctggggcatctaggctg
ttgcaaatgaagtatgctgatggagaactggatagactagagcataaattgttcgttggt
atgcttccaaaaactgtttctgatgctgaggtatcagctctattttcggtatatggaacg
ataaaagacctgcaaattctcaggggctctggtcaaactagcaaaggttgtgctcttttt
aaatttgagacaatagagcaagcacttgccgcaatagaggcacttaatggaaagcataag
atggagggttcttctattcctttggtggtcaagtgggctgatacagagaaggaaagacag
actcggaaagttcgaaaagcacttttgcaagcttcgactttgcaaatagcttctggacaa
catcaagccgtatatggtgctctaccaatgagttatgtgcctacatacaatggctatggt
tatcagacaccaggtccttataattttgtgcgctatcgtctacctcagttgcagaatcga
ccaaccttccctaatttggtaccaactacagcccaaggacgttctatatgtggagccgta
cctgatcctgtacccggaacttcaccaagtaattatgcagcgccatctgcaaactacata
ggttctgcttatccaactacaccaggggttcattatccctggacacatcctagagcaatc
atgaataatcagcaatttggagcttcatcaactttgtcaccctttagttctagtagccaa
gctgtagctgcttcacgtgttagagcaagctctgttgttcacgttgaaggtcctctcgga
gctaatctatttatcttccacattccccaacaatatggtgatatacagcttgcaaatctg
tttcagcgttttggtagggtactgagtgcaaaagtttttgttgacaaaacaacgaatgtc
agcaagtgttttggtataaattctcttaaatttttctatctgttgcaagttatatttaat
ggttttccttctaatgagccgctatctgtaggatttgttagttatgattcaccagcagca
gcacaaaatgcaattaatgcaatgaatggttatcagttaggtggtaaaaaattgaaggtt
caacttaaaagggagagttaa
DBGET
integrated database retrieval system
